CB304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNE7 (Tryptophan synthase alpha chain OS=Synechococcus elongatus (strain PCC 7942) GN=trpA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R + V LL+EI++ T KP+ VGFGIS E +QV WGADGVIVGSA V L E+G++ + + L+ A+ Sbjct: 176 VSVTGVTGMRQGMQSRVADLLQEIRQGTDKPIGVGFGISGAEQARQVRDWGADGVIVGSAFVNRL-----QEQGVEGVATLCRELRQAI 259
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_BACSK (Tryptophan synthase alpha chain OS=Bacillus clausii (strain KSM-K16) GN=trpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.368e-13 Identity = 41/97 (42.27%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 266 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLG-------EAQSPEEGLKELEKFAKSLKSALP 535 VSS+GVTGAR ++ V+ L+ +KE++ P VGFGIS E V+++ G ADGV++GSA+V+ +G +A+S +E +KE+E++ SL P Sbjct: 172 VSSLGVTGARKTLHPQVEAFLKLVKEASPVPFVVGFGISSYEQVEEM-GRHADGVVIGSAIVEQIGLRCEALKQAESRDEAVKEIEQYVNSLLHPAP 267
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METJA (Tryptophan synthase alpha chain OS=Methanocaldococcus jannaschii GN=trpA PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.093e-13 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = -1 Query: 278 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-------GEAQSPEEGLKELEKFAKSLK 535 VS G+TGAR ++ + L++ +K+ + P VGFGISK EHV+++ ADG IVGSA+VK++ G+ + E+ LKELE+F K+LK Sbjct: 177 VSVTGITGAREKVAEETKELIKRVKKFSKIPACVGFGISKREHVEEITEI-ADGAIVGSAIVKIVEKHLDENGQIKDEEKFLKELEEFVKNLK 268
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_PORYE (Tryptophan synthase alpha chain OS=Porphyra yezoensis GN=trpA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.040e-13 Identity = 32/89 (35.96%), Postives = 57/89 (64.04%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG ++ ++ ++ L +K T K + +GFGIS E ++++ GW +G+++GSA VK L PE GL++++ F + K+A+ Sbjct: 174 VSTTGVTGQKSQLTSQLKELTETVKTMTNKSIILGFGISTTEQIKEIKGWNINGIVIGSAFVKRL-SGNVPEAGLEQIQSFCQDAKNAI 261
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METTM (Tryptophan synthase alpha chain OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=trpA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.276e-13 Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-AQSPEEGLKELEKFAKSLKSA 535 VS +GVTGAR+ + L+ +K + + PV VGFG+S+PEHV+ +A GADGVIVGSA++ L+ + E L+E+ + + +K+A Sbjct: 172 VSVMGVTGARSRVEESTLELIERVKGAGSLPVMVGFGVSQPEHVRMLADAGADGVIVGSAIIDLISKNLDDRERMLQEIYEMVRKMKTA 260
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNS9 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain CC9902) GN=trpA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.890e-13 Identity = 43/88 (48.86%), Postives = 57/88 (64.77%), Query Frame = -1 Query: 290 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQ----SPEEGL--KELEKFA 535 VS GVTG R+++ V+ L++ +K+S+ PVAVGFGIS + V+QV WGADG IVGSA+VK + A + E GL EL K A Sbjct: 181 VSVTGVTGERSTMETRVEGLVQALKQSSPVPVAVGFGISGVDQVRQVRSWGADGAIVGSALVKRMASASLGSVAAEAGLFCSELRKAA 268
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_ARCFU (Tryptophan synthase alpha chain OS=Archaeoglobus fulgidus GN=trpA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.005e-12 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG R IS L+ K KPVAVGFG+SK +HV+Q+ GADGV+VGSA V+L+ E E +++ ++L+S L Sbjct: 161 VSTYGVTGERDRISPLAFEALKRAKGICRKPVAVGFGVSKADHVRQLISAGADGVVVGSAFVRLINE--KGERATEDIRALTENLRSGL 247
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_METTH (Tryptophan synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=trpA PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.618e-12 Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 535 VS +GVTGAR+ + L++ +K + PV VGFG+S+PEHV+ + GADGVIVGSA++ ++ G E L+ + + A +LK+A Sbjct: 178 VSVMGVTGARSRVEDATIELIKRVKAEGSLPVMVGFGVSRPEHVRMLRDAGADGVIVGSAIIDVISGNLGDRELMLQRIHEMAGTLKAA 266
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_GRATL (Tryptophan synthase alpha chain OS=Gracilaria tenuistipitata var. liui GN=trpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.618e-12 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV-KLLGEAQSPEEGLKELEKFAKSLKSAL 535 VSS GVTG R + +Q L IK +T K + +GFGI+ P+ + Q+ W DG++VGSA++ ++GE P++ L L F K LK ++ Sbjct: 174 VSSCGVTGLRDNFDVKIQHLANNIKSTTNKLIMLGFGINNPDQISQIINWNIDGIVVGSAIITHIVGEL--PQDMLNSLAHFCKKLKYSI 261
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSL (Tryptophan synthase alpha chain OS=Geobacter sulfurreducens GN=trpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.420e-12 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTGAR+ + V + + I+E+ T PV VGFGIS P+ QVA ADGV+VGSA+VKL + E G +E+ F +L+ A+ Sbjct: 176 VSVTGVTGARSGVEASVSSNVAAIREAITVPVVVGFGISTPDQAAQVAA-SADGVVVGSAIVKLFERFTAAELG-REVATFVSALREAI 262 The following BLAST results are available for this feature:
BLAST of CB304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304455 ID=CB304455; Name=CB304455; organism=Citrus sinensis; type=EST; length=535bpback to top |