CB304468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + SG+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ SWD+HW++WVGP IG LA + ++ Sbjct: 173 YTKGSGLGA------EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQ 275
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = -1 Query: 299 QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 625 +T + + AV E+V+T LV V+A+ +D ++ +LG+ A + IG V L G F G SMNPA SFGPA++ + HW++WVGPL G LA ++Y F Sbjct: 125 ETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS-MDSRQ-TLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 281 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 607 +L++ AVV E+++TF L ++++ + +G+ A ++IG V L G F G SMNPA SFGPA+V + +HWV+WVGP++G +A I+Y + S Sbjct: 121 SLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAAVAAILYFYLLFPNS 229
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 305 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 610 + SG+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ SWD+HWV+WVGP IG LA + + Sbjct: 172 YTKGSGLGA------EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYH 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13 Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 305 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 610 + SG+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ SWD+HWV+WVGP IG LA + + Sbjct: 172 YTKGSGLGA------EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYH 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13 Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = -1 Query: 299 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 577 A+V EI+++F L++ + A D + + G +A IA+G + N+ G GASMNPA S GPA+V + WVY VGP +G G VY F Sbjct: 161 ALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNF 251
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12 Identity = 44/110 (40.00%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + SG+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++WVGP IG LA + ++ Sbjct: 173 YTKGSGLGA------EIVGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQ 275
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = -1 Query: 299 NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 631 N A ++SG A+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++W GP IG A +++ Sbjct: 147 NANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQY 263
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = -1 Query: 305 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 628 G A A++ G + + EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A+V S +W++HW++WVGP IG LA I + Sbjct: 162 GAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYH 275
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + SG+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++WVGP IG LA + ++ Sbjct: 172 YTKGSGLGA------EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQ 274 The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bpback to top |