CB304468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = -1 Query: 305 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 577 A+V EI+++F L++ + A D + ++G +A IA+G + N+ G GASMNPA S GPALV + + WVY VGP++G G VY Sbjct: 161 ALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVY 249
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = -1 Query: 230 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF-FINQSHEQLPTTEY*AKSLPSM 577 ++V EI+ TF L++ + A D + ++G +A +A+G + N+L G GASMNPA S GPALVS + + WVY VGP++G Y F N+ ++ + KS M Sbjct: 162 SLVIEIITTFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYTSIWVYVVGPVVGAVAGAWAYNLIRFTNKPLREITKSTSFLKSTSRM 276
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 302 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 604 +S+G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A+V S +W + W++WVGP IG +A + ++ Sbjct: 165 VSAGYSTGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 271
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 34/95 (35.79%), Postives = 57/95 (60.00%), Query Frame = -1 Query: 299 WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 583 W+++V E+++TF +++ A A D + ++G +A +A+G V + GA G SMNPA + GPAL S +D W+Y++GP++G Y F Sbjct: 164 WHSLVVEVIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTF 256
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = -1 Query: 281 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 613 A ++ G A+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+ W++WVGP + G LA Y + + S Sbjct: 151 ANTVADGYSKGTALGAEIIGTFVLVYTVFS-ATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFL-GALAAAAYHQYILRAS 266
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++WVGP IG LA I ++ Sbjct: 174 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQ 276
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = -1 Query: 305 LSSGVGAWNAVVFEIVMTFGLVYTVYATAL-DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 604 L+ G+ A + E+++T L V T++ + L IAP AIG + + G F G ++NP GP+++S W +HWVYW+GP++G LA +Y Sbjct: 149 LAPGMNTGQAFLMEMMLTSILCLCVLGTSVFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISGVWSHHWVYWLGPIVGAILAAFIY 249
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = -1 Query: 302 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 604 L++G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A+V S +W + W++WVGP IG +A + ++ Sbjct: 160 LAAGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 266
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 305 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 610 + SG+GA EI+ TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HWV+WVGP IG LA + + Sbjct: 172 YTKGSGLGA------EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYH 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12 Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = -1 Query: 302 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 628 G A ++SG + + EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP +G LA I ++ Sbjct: 163 GNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQ 277 The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bpback to top |