CB304468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W +HW++WVGP IG LA I ++ Sbjct: 178 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQ 280
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11 Identity = 32/85 (37.65%), Postives = 54/85 (63.53%), Query Frame = -1 Query: 329 WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 583 W+++V EI++TF +++ A A D + ++G +A +A+G V + GA G SMNPA + GPAL S + W+Y++GP++G Sbjct: 162 WHSLVIEIIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLG 244
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.897e-11 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A+V W++HW++WVGP IG LA + ++ Sbjct: 176 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQ 278
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = -1 Query: 230 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF-FINQSHEQLPTTEY*AKSLPSM 577 ++V E ++TF L++ + A D + ++G +A +A+G + N+L G GASMNPA S GPA++ + + WVY VGP+ G Y F N+ ++ + KS+ M Sbjct: 166 SLVLEFIITFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGEYRSIWVYIVGPVAGAVAGAWAYNIIRFTNKPLREITKSGSFLKSMNRM 280
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 302 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGT----IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 610 + G+GA EIV TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W +HW++WVGP IG LA I ++ Sbjct: 173 YTKGDGLGA------EIVGTFILVYTVFS-ATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQ 275
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11 Identity = 42/120 (35.00%), Postives = 62/120 (51.67%), Query Frame = -1 Query: 281 FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 640 F++ G T + +L A E ++TF L++ V A A D + ++G +A IA+G V NIL G G SMNP + GPA+ S ++ + WVY V P +G VY +N S Sbjct: 180 FMSGGVTIPSVSLGQ------AFALEFIITFILLFVVTAVATDTR--AVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKLNDS 291
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = -1 Query: 305 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 577 ++V E V+TF L++ + A A D + ++G +A +A+G + N+L G GASMNPA S GPALV + WVY +GP G Y Sbjct: 174 SLVIEFVITFYLMFVIMAVATDDQ--AVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTALWVYILGPFAGAAAGAWAY 262
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 302 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 613 A A+S G + + E+V TF LVYTV++ A D K+ + + +AP+ IGF V LA G +NPA S G A++ W HW++WVGP G LA + ++ Sbjct: 173 ANAVSPGYTKGDGLGAEVVGTFVLVYTVFS-ATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQ 282
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11 Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = -1 Query: 299 WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 583 W+A+V EIV+TF +++ A A D + ++G +A +A+G V + G G SMNPA + PA+ S + W+Y++GP++G VY + Sbjct: 167 WHALVIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTY 259 The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bpback to top |