CB304468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.493e-32 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = -1 Query: 269 KFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 643 ++++ G T AL +G+ +V E+++TF L++ YA LDP+ + TI P+ G IVGAN LAGG F GASMNPA SFGPA+ + W NHWVYW+GPL+GG LAG VYE F +N++HE L Sbjct: 128 RYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATGVWTNHWVYWIGPLLGGSLAGFVYESLFMVNKTHEPL 252
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.676e-32 Identity = 65/118 (55.08%), Postives = 85/118 (72.03%), Query Frame = -1 Query: 257 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-QSHEQLPTTE 607 A + GVGA AV E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA SFGPAL + W +HW+YWVGPLIGG LAG+VYE F+ HE LP + Sbjct: 132 APAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31 Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = -1 Query: 269 KFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE-FFFINQSHEQL 643 +F++ G T AL G+ +V E+++TF L++ YA LDP+ + I P+ G IVGAN LAGG F GASMNPA SFGPAL + W NHWVYW+GPL+GG LAG VYE F + + HE L Sbjct: 126 RFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDPRS-QVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDWTNHWVYWIGPLLGGPLAGFVYESLFLVQKMHEPL 250
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29 Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = -1 Query: 266 KFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE--FFFINQSHEQLP 643 +++T G T AL+ GVG VV E V TF L++ +YAT LDP+K G P+ G +VGAN +AG A GASMNPA SFGPA+ S W +HWVYWVGPL GG LA +VYE F +H+ LP Sbjct: 119 RWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGA-GPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASGVWTHHWVYWVGPLAGGPLAVLVYECCFMAAAPTHDLLP 245
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.491e-28 Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 266 VTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-----QSHEQLP 637 +T G T AL+ GVG V E V TF L+ + AT LDP++ + P+ G +VGAN +AGGA GASMNPA SFGPAL + W +HWVYWVGPL GG LA + YE F++ +H+ LP Sbjct: 126 LTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEWAHHWVYWVGPLAGGPLAVVAYELLFMDVEDAGGAHQPLP 254
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.186e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 302 QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYE 625 Q + ++ + + A V E V+ F LVYTV+ TA DP++G + PI IGF+ GAN+LA G F G SMNPA +FG A+V S+ N VYWVGPL+GG A +VY+ Sbjct: 130 QHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQAVYWVGPLLGGATAALVYD 236
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.311e-20 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 293 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 628 G TT L++G G ++ E+++TF LV+T++A+ + G+IA +AIGF V L + GASMNPA SFGPA++ +W+NHW+YWVGP+IG LAG +YE+ F Sbjct: 149 GVTTVHGNLTAGHG----LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 255
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.712e-20 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 293 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 628 G TT L++G G ++ E+++TF LV+T++A+ + G++A +AIGF V L + GASMNPA SFGPA++ +W+NHW+YWVGP+IG LAG +YE+ F Sbjct: 146 GVTTVHGNLTAGHG----LLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 252
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.920e-20 Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 293 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 628 G TT L++G G ++ E+++TF LV+T++A+ + G+IA +AIGF V L + GASMNPA SFGPA++ +W+NHW+YWVGP+IG LAG +YE+ F Sbjct: 146 GVTTVHGNLTAGHG----LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.981e-20 Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = -1 Query: 293 AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 586 A + ++ E+++TF LV+T++A+ + G+IA +AIGF V L + GASMNPA SFGPA++ +W+NHW+YWVGP+IG LAG +YE+ F Sbjct: 156 AGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252 The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bpback to top |