CB304468

Overview
NameCB304468
Unique NameCB304468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15
Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -1
Query:  296 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAL----DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF 616
            SA  L++GV        E+V T  LV+ V   A+    DPK   +  +AP+AIG  V A +     F G S+NPA SFGPA+ S +W  H++YW GP+ GG +AG+ +  F
Sbjct:  142 SATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPK---ISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVFSDTWHRHYIYWFGPICGGIIAGLFWRIF 249          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = -1
Query:  275 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 604
            L+ GV +   +  EI+ T  LV  V AT  D ++  LG   P+AIG  V    L    + G  +NPA SFG ++++ ++ +HW++WVGP IGG LA ++Y+F    +S +
Sbjct:  131 LAPGVNSGQGLGIEIIGTLQLVLCVLATT-DRRRRDLGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFKDHWIFWVGPFIGGALAVLIYDFILAPRSSD 239          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = -1
Query:  299 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 613
            A +L+ G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  156 ANSLADGYNTGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 266          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = -1
Query:  299 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 613
            A +L+ G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  158 ANSLADGYSTGTGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQF 268          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = -1
Query:  299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 604
            LS GV A   +  EI++TF LV  V A   D ++  +    P+AIG  V    L    + G  MNPA SFG A+++ ++  HW++WVGP+IGG  A I+Y+F
Sbjct:  133 LSPGVSAGQGLGVEILVTFQLVLCVVAVT-DRRRHDVSGSVPLAIGLSVALGHLIAIDYTGCGMNPARSFGSAVLTKNFTYHWIFWVGPMIGGAAAAIIYDF 233          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 40/103 (38.83%), Postives = 65/103 (63.11%), Query Frame = -1
Query:  299 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 607
            AL++   A  AV  E+ +T  LV  ++A+  + +  ++GT A ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:  120 ALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVGTPA-LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = -1
Query:  299 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 607
            AL +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:  120 ALHNNATAGQAVTVELFLTMQLVLCIFASTDERRSDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAVIGSLLYNY 221          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.301e-15
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = -1
Query:  299 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 607
            ALS+   A  AV  E+ +T  LV  ++A+  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  L  ++Y +
Sbjct:  120 ALSNSTTAGQAVTVELFLTLQLVLCIFAST-DERRGENPGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAILGSLLYNY 221          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.230e-15
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = -1
Query:  299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604
            +S G     A+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFGPA++     +WD+ W+YWVGP +G  +A I +++
Sbjct:  163 VSDGYNKGTALGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQY 270          
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14
Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = -1
Query:  299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604
            L+ G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++   S  WD+HW++WVGP IG  +A   ++F
Sbjct:  159 LADGYNTGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQF 266          
The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
AQPB_DICDI3.694e-1540.54Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQP1_CANFA3.694e-1537.27Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
PIP22_ARATH4.825e-1540.18Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP21_ARATH4.825e-1540.18Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
AQPA_RANES4.825e-1541.18Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP2_BOVIN4.825e-1538.83Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
AQP2_MOUSE6.301e-1538.83Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQP2_HUMAN6.301e-1538.83Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
PIP27_MAIZE8.230e-1540.37Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP23_ARATH1.404e-1440.37Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_C05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_C05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGGAAATAGACATCAAAGCA
ATTGAAGTGCGAGTAGAAATACAAAGCCATAGCCTGGGACTCCATAATTA
TCGCGATACAATAATCCAGCAGCTCATGACGATGGAAACAGATCAACGGC
CATAAATTAAACACAAATTAAAAATAAAAAGAAAGAACCTCGGTAAAAGC
AAATTAAATACAACATCCGTGCAAACTCACATAGATGGCAAGCTTTTAGC
TTAGTACTCGGTTGTTGGGAGCTGCTCGTGAGACTGGTTAATGAAGAAGA
ACTCGTAGACGATGCCAGCTAGCCCACCACCGATGAGTGGCCCGACCCAG
TAGACCCAGTGGTTGTCCCAGCTCCAGCTTACCAAAGCTGGCCCGAATGA
CACTGCTGGGTTCATTGAAGCTCCATCAAACGCCCCGCCCGCCAAGATGT
TGGCTCCTACAATGAAACCAATTGCAATTGGTGCAATTGTCCCCAAGCTT
CCCTTCTTTGGGTCCAGGGCTGTGGCATACACTGTGTACACTAGTCCGAA
TGTCATCACGATCTCGAAAACGACTGCGTTCCATGCACCAACTCCAGATG
AGAGAGCAAAAGCAGATGTGGTCTGGCCGTTGGTAACGAACTT
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