CB304468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.027e-13 Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = -1 Query: 299 GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 628 G T A S G G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +W NHW++WVGP +G +A +++ Sbjct: 162 GANTLAAGYSKGTG----LAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQY 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604 LS G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +WD+ W++WVGPLIG +A +++ Sbjct: 165 LSDGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604 LS G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +W +HW++WVGPLIG +A +++ Sbjct: 166 LSDGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQY 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604 LS G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +WD+ W++WVGPLIG +A +++ Sbjct: 166 LSDGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 273
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = -1 Query: 299 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 613 A ++ G A+ EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+HW++WVGP +G A +++ Sbjct: 149 ANTVADGYSTGTALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQY 259
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604 L+ G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+ W++WVGP+IG A ++F Sbjct: 161 LADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQF 268
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13 Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = -1 Query: 299 QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 625 +T + + V AV E+++T LV V+A+ D ++ S G+ A + IG V L G F G SMNPA SFGPA++ + HWV+WVGPL+G LA ++Y F Sbjct: 128 ETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFAST-DSRQTS-GSPATM-IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGKFTVHWVFWVGPLMGALLASLIYNF 233
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13 Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = -1 Query: 281 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 607 AL++ A+V E+++TF L ++++ + +G+ A ++IG V L G F G SMNPA SFGPA+V + +HWV+WVGP++G LA I+Y + S Sbjct: 121 ALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAMLAAILYFYLLFPSS 229
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = -1 Query: 281 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFINQS 607 AL++ A+V E+++TF L ++A+ + +G+ A ++IG V L G F G SMNPA SFGPA+V + HWV+WVGP++G LA I+Y + S Sbjct: 121 ALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 229
BLAST of CB304468 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 299 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 604 LS G + EI+ TF LVYTV++ A DPK+ + + +AP+ IGF V LA G +NPA S G A++ +WD+ W++WVGPLIG +A +++ Sbjct: 165 LSDGYSKGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQY 272 The following BLAST results are available for this feature:
BLAST of CB304468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304468 ID=CB304468; Name=CB304468; organism=Citrus sinensis; type=EST; length=643bpback to top |