CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 75/106 (70.75%), Postives = 84/106 (79.25%), Query Frame = -2 Query: 375 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGK-----LKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHI 677 MAFRVPT +VSVVDLTV LEK ASYD IK AIK +EGK LKG+LGYTED VVSTDF G + +SVFDA AGIAL+ FVKLVSWYDNE GYS +V+DL+ HI Sbjct: 229 MAFRVPTPNVSVVDLTVNLEKPASYDAIKQAIKDAAEGKTFNGELKGVLGYTEDAVVSTDFNGCALTSVFDADAGIALTDSFVKLVSWYDNETGYSNKVLDLVAHI 334
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = -2 Query: 384 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLI 677 MAFRVPT +VSVVDLT RL + ASY IK A+KA ++G + GIL YTED VVSTDF GDS SS+FDAKAGIAL+ FVKLVSWYDNE+GYS RVVDL+ Sbjct: 327 MAFRVPTPNVSVVDLTCRLAQPASYTAIKEAVKAAAKGPMAGILAYTEDQVVSTDFNGDSHSSIFDAKAGIALNDNFVKLVSWYDNEYGYSHRVVDLL 424
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++ RVPT DVSVVDL VRLEK ASY++IK ++ +EG+ KGI+ YT++DVVSTDF+ D+ S VFDAKAGI LS FVKL++WYDNEWGYS RV +L+ ++AK Sbjct: 229 LSMRVPTQDVSVVDLVVRLEKPASYEQIKEVMRKAAEGEYKGIIAYTDEDVVSTDFISDNNSCVFDAKAGIQLSPNFVKLIAWYDNEWGYSRRVCNLLQYVAK 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_LYOSH (Glyceraldehyde-3-phosphate dehydrogenase OS=Lyophyllum shimeji GN=GPD PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++FRVPT+DVSV+DL VRLEK ASY++IK +K SEG KGI+ YTE+ VVS DF+G SS+FDA+AGI L+ FVKL+ WYDNEWGYS RV DL+V A+ Sbjct: 229 LSFRVPTIDVSVIDLVVRLEKPASYEDIKKTVKEASEGAYKGIIEYTEEQVVSADFIGHHASSIFDAQAGIQLNPNFVKLIVWYDNEWGYSARVCDLLVFAAE 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.250e-32 Identity = 69/102 (67.65%), Postives = 82/102 (80.39%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 MAFRVPT +VSVVDLT + EK SY+EI AA+K +EG+LKGILGYT DDVVS DF D RSS+FDA AGI L+ F K+VSWYDNEWGYS RV+DL++ +A Sbjct: 232 MAFRVPTPNVSVVDLTFKTEKATSYEEICAAMKTAAEGELKGILGYTADDVVSMDFRTDPRSSIFDAGAGIGLNSNFFKVVSWYDNEWGYSCRVIDLMLTMA 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32 Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = -2 Query: 384 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLI 677 MAFRVPT DVSVVDLT RL + Y IK AIKA ++G + GIL YTED+VVSTDF+ D+ SS+FDAKAGIAL+ FVKL+SWYDNE+GYS RVVDL+ Sbjct: 290 MAFRVPTPDVSVVDLTCRLAQPTPYSAIKDAIKAAAKGPMAGILAYTEDEVVSTDFLSDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSNRVVDLV 387
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_MELGA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32 Identity = 70/95 (73.68%), Postives = 77/95 (81.05%), Query Frame = -2 Query: 393 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVV 677 MAF VPT +VSVVDLT RLEK A YD+IK +KA ++G LKGILGYTED VVS DF GDS SS FDA AGIAL+ FVKLVSWYDNE+GYS RVV Sbjct: 140 MAFHVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDHFVKLVSWYDNEFGYSNRVV 234
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32 Identity = 69/102 (67.65%), Postives = 83/102 (81.37%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 MA RVPT DVSVVDLT RL+K A+ DEIKAA+K + G +KGIL YTED VVSTDF GD+ SS+FD+ A I+L+ FVKL++WYDNE+GYS RVVDLI +IA Sbjct: 236 MANRVPTPDVSVVDLTCRLQKGATMDEIKAAVKEAANGPMKGILEYTEDQVVSTDFTGDTHSSIFDSLACISLNPNFVKLIAWYDNEYGYSNRVVDLISYIA 337
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32 Identity = 66/101 (65.35%), Postives = 82/101 (81.19%), Query Frame = -2 Query: 375 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHI 677 MAFRVP DVSVVDLT RL + ASY IK ++K + G +KGILGYTED VVS+DFVGD+ SS+FDA AGI+L+ FVKL+SWYDNE+GYS RV DL++++ Sbjct: 231 MAFRVPVADVSVVDLTCRLTRPASYANIKESVKKAAHGPMKGILGYTEDSVVSSDFVGDTHSSIFDAGAGISLNDNFVKLISWYDNEFGYSHRVADLLMYM 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.749e-32 Identity = 68/103 (66.02%), Postives = 83/103 (80.58%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++FRVPT+DVSVVDL VRLEK A Y EI AAIK SE KGILG+T D VVSTDFVG + SS+FD+ AGI L+ FVKL++WYDNE+GYS RVVDL+ ++A+ Sbjct: 228 LSFRVPTLDVSVVDLVVRLEKPADYKEIVAAIKEASETTHKGILGFTSDSVVSTDFVGSTDSSIFDSTAGIQLNPNFVKLIAWYDNEYGYSRRVVDLLKYVAE 330 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |