CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 62/101 (61.39%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 375 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHI 677 MAFRVP DVSVV+LT RL + SY EIK A+K +EG +KG +GYTE VVS+DF+GD+ SS+FDA AGI+ + FVKL+SWYDNE+GYS RV DL++++ Sbjct: 231 MAFRVPVADVSVVELTCRLSRPGSYAEIKGAVKKAAEGPMKGYVGYTEYSVVSSDFIGDTHSSMFDAGAGISFNDNFVKLISWYDNEFGYSHRVADLLLYM 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_ECHMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGK-LKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 MAFRVPT +VSVVDLT +L K A+YD+IKAA+K SE LK IL YTED VVSTDF+ + SS FDA+AGIAL+ FVKL++WYDNE+GYS RVVDLI ++ K Sbjct: 230 MAFRVPTPNVSVVDLTCKLSKPATYDQIKAAVKRASESSALKRILEYTEDQVVSTDFLSTTCSSTFDARAGIALNDTFVKLIAWYDNEFGYSCRVVDLISYMFK 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 62/103 (60.19%), Postives = 85/103 (82.52%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 MAFRVP +VSVVDLTVR +K A+Y EI I+ S+ ++KGI+GYTED+VVSTDF G+ +S+FDAKAG++L+K FVKL++WYDNE GYS++V+DL+ ++K Sbjct: 229 MAFRVPVSNVSVVDLTVRYKKSATYSEICQKIQQASQKEMKGIMGYTEDEVVSTDFNGEELTSIFDAKAGLSLNKNFVKLIAWYDNETGYSSKVLDLVSLVSK 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.606e-30 Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = -2 Query: 414 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEW 677 MAFRVPT +VSVVDLT RLEK AS D IKAA+K +EG LKGILGYTED VVSTDF+GDSRSS+FDA A I+L+ FVKLVSWYDNE+ Sbjct: 237 MAFRVPTPNVSVVDLTARLEKPASLDAIKAAVKKAAEGNLKGILGYTEDQVVSTDFLGDSRSSIFDAGACISLNPHFVKLVSWYDNEF 324
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 62/102 (60.78%), Postives = 80/102 (78.43%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 M+ RVPT +VSVVDLT R +K +YD+IK A+K S +LKGI+ Y+ED +VS+D GD+ S +FDA AGIAL+ F+KLV+WYDNEWGYS RV+DLI +IA Sbjct: 230 MSMRVPTSNVSVVDLTCRTDKSVTYDQIKEAMKKASANELKGIMSYSEDALVSSDLNGDTHSCIFDATAGIALNDHFIKLVAWYDNEWGYSRRVIDLIAYIA 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P2_DROSU (Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) OS=Drosophila subobscura GN=Gapdh2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30 Identity = 64/87 (73.56%), Postives = 76/87 (87.36%), Query Frame = -2 Query: 417 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNE 677 MAFRVPT +VSVVDLTVRL K ASYDEIKA ++ + G LKGILGYT+++VVSTDF+ D+ SSVFDAKAGI+L+ KFVKL+SWYDNE Sbjct: 218 MAFRVPTPNVSVVDLTVRLGKGASYDEIKAKVQEAANGPLKGILGYTDEEVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNE 304
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.806e-30 Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 M+ RVPT +VSVVDLT R +K +YD+IK A+K S +LKGI+ Y+ED +VS+D GD S +FDA AGIAL+ F+KLV+WYDNEWGYS RV+DLI +IA Sbjct: 230 MSMRVPTSNVSVVDLTCRTDKSVTYDQIKEAMKKASANELKGIMSYSEDALVSSDLNGDPHSCIFDATAGIALNDHFIKLVAWYDNEWGYSRRVIDLIAYIA 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28 Identity = 61/101 (60.40%), Postives = 80/101 (79.21%), Query Frame = -2 Query: 375 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHI 677 MAFRVP DVSVVDLT LEKDA+YDEI A IK SE +LKGI+ YT +DVVS+DF+ + + FD+KAGI L+ +FVKLV+WYDNE+GY+ ++V+L ++ Sbjct: 231 MAFRVPVPDVSVVDLTCTLEKDATYDEICAEIKRGSENELKGIMTYTNEDVVSSDFLSTTSTCNFDSKAGIMLNSRFVKLVAWYDNEFGYANKLVELAKYV 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PG_TRYCR (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKA----GIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 M+FRVPT DVSVVDLT +D S EI AA+K S+ +KGILGYT++++VS DF+ D+RSS++D+KA + ++F K+VSWYDNEWGYS RVVDL+ H+A Sbjct: 246 MSFRVPTPDVSVVDLTFTAARDTSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATLQNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 5.434e-28 Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKA----GIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 MAFRVPT DVSVVDLT +D S EI AA+K S+ +K ILGYT++++VS DF+ DSRSS++D+KA + ++F K+VSWYDNEWGYS RVVDL+ H+A Sbjct: 246 MAFRVPTADVSVVDLTFIATRDTSIKEIDAALKRASKTYMKNILGYTDEELVSADFISDSRSSIYDSKATLQNNLPNERRFFKIVSWYDNEWGYSHRVVDLVRHMA 351 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |