CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.772e-16 Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = -2 Query: 387 MAFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 677 +A RVPT +VSVVDL V +EK + +++ A + + G LKG+L + +VS DF SS D+ + + VK+V+WYDNEWGYS RVVDL Sbjct: 316 IALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDL 413
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = -2 Query: 387 MAFRVPTVDVSVVDLTVRLEKDA-SYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 677 +A RVPT +VSVVDL + +EK + +++ A + + G +KGIL + +VS DF S+ D+ + + VK+V+WYDNEWGYS RVVDL Sbjct: 313 IALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 410
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHESA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=epd PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L+K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIIDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 +A RVPT++V+ +DL+V + D + + A+KA+++ +L+GIL YT + +VS DF D S + D K+ +KL+ W DNEWG++ R++D Sbjct: 233 IAVRVPTINVTAMDLSVTVNTDVDLNAVNNALKAQAKDRLEGILSYTAEPLVSIDFNHDPHSCIIDGTQTRVSHKRLIKLLVWCDNEWGFANRMLD 328
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_ALTMD (D-erythrose-4-phosphate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=epd PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 37/96 (38.54%), Postives = 62/96 (64.58%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 +A RVPT++V+ +DL+V L+ + +++ A+++ G+L+GIL YTE+ +VS DF D S + D K+ VK + W DNEWG++ R++D Sbjct: 232 IAVRVPTINVTAMDLSVTLQSKVTIEQVNQALRSAKAGRLQGILDYTEEPLVSVDFNHDPHSCIVDGTQTRVSHKQLVKTLVWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHESR (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=epd PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L+K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHESM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=epd PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L+K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHEON (D-erythrose-4-phosphate dehydrogenase OS=Shewanella oneidensis GN=epd PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15 Identity = 37/96 (38.54%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L+K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEI-----KAAIKAESEGK--LKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP D S++DLTV + K +S +E+ +AA K GK LK IL Y ED +VSTD VG+ S++FDA + V + +WYDNEWGYS R+ DL++++A+ Sbjct: 231 ARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVIDN-LVHIAAWYDNEWGYSCRLRDLVIYLAE 339
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.388e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 363 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAKTQ 677 ++ RVPT++V+ +DL+V L K + + +K +EG G++G+T + +VS DF D RSS+ D VKL+ W DNEWG++ R++D + + K + Sbjct: 232 ISVRVPTINVTAIDLSVTLNKRVDIETVNQVLKQATEGSFSGVVGFTNEPLVSCDFNHDPRSSIVDGTQTRVSDGHLVKLLLWCDNEWGFANRMLDTSLEMIKAK 336 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |