CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHESW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain W3-18-1) GN=epd PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.813e-15 Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLAKTVDIASVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPC (D-erythrose-4-phosphate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=epd PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.813e-15 Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V L K + ++ + G+ GILGYT++ +VS DF D RSS+ D + + VKL+ W DNEWG++ R++D Sbjct: 232 ISVRVPTINVTAIDLSVTLAKTVDIASVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSSIVDGTQTRVSAGQLVKLLLWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 40/97 (41.24%), Postives = 63/97 (64.95%), Query Frame = -2 Query: 387 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDL 677 MA RVPT +VS+VDL V LE++ + ++ A K L G+L E +VS DF + S++ D+++ + + + VK+++WYDNEWGYS RVV++ Sbjct: 231 MALRVPTKNVSLVDLVVDLEQNVTVTQVNDAFK---NADLSGVLDVEEAPLVSVDFNTNPHSAIIDSQSTMVMGQNKVKVIAWYDNEWGYSNRVVEV 324
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHEHH (D-erythrose-4-phosphate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=epd PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 363 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAKTQ 677 ++ RVPT++V+ +DL+V L K + + +K +EG G++G+T + +VS DF D RSS+ D VKL+ W DNEWG++ R++D + + K + Sbjct: 232 ISVRVPTINVTAIDLSVTLNKRVDIELVNRVLKQATEGSFSGVVGFTNEPLVSCDFNHDPRSSIVDGTQTRVSDGHLVKLLLWCDNEWGFANRMLDTSLEMIKAK 336
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_XANFL (Glyceraldehyde-3-phosphate dehydrogenase OS=Xanthobacter flavus GN=gap PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 + RVPT +VSV+DL ++ S +EI AI A + +LKGILG+T+ VS DF + SS F + V+++SWYDNEWG+S R+ D V + K Sbjct: 232 SIRVPTPNVSVIDLKFVAKRATSKEEINEAIIAAASQQLKGILGFTDQPNVSIDFNHNPNSSTFHLDQTKVMEGTLVRVLSWYDNEWGFSNRMSDTAVAMGK 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 39/103 (37.86%), Postives = 67/103 (65.05%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 MA RVP + S+ + V L+ D + ++ AA + + G+L+G+LG T DDVVS+D +GD S+ D ++ +S K+++WYDNE+G+S R++D+ +I + Sbjct: 234 MAIRVPVPNGSITEFVVDLDDDVTESDVNAAFEDAAAGELEGVLGVTSDDVVSSDILGDPYSTQVDLQSTNVVS-GMTKILTWYDNEYGFSNRMLDVAEYITE 335
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_CORGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Corynebacterium glutamicum GN=gap PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = -2 Query: 372 AFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 674 A RVP + S DLT + + + + I AAIK + G+ L Y+E+ +VSTD V DS S+FDA +S VK+VSWYDNEWGY+ +++ L +A Sbjct: 232 ALRVPVITGSATDLTFNTKSEVTVESINAAIKEAAVGEFGETLAYSEEPLVSTDIVHDSHGSIFDAGL-TKVSGNTVKVVSWYDNEWGYTCQLLRLTELVA 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 +A RVPT++V+ +DL++ + K + ++ A++ S G L GIL YTE+ +VS DF D+ S + D VK++ W DNEWG++ R++D Sbjct: 232 IAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 +A RVPT++V+ +DL++ + K + ++ A++ S G L GIL YTE+ +VS DF D+ S + D VK++ W DNEWG++ R++D Sbjct: 232 IAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDFNHDAHSCIIDGTQTRVSDANLVKMLMWCDNEWGFANRMLD 327
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++ RVPT++V+ +DL+V L+K D + + + G +G++GYT +VS DF D RSS+ D VKL+ W DNEWG++ R++D + + K Sbjct: 232 ISVRVPTINVTAIDLSVTLDKRVDIDTVNQVLSQAANGSYQGVVGYTNAPLVSCDFNHDPRSSIVDGTQTRVSDGHLVKLLLWCDNEWGFANRMLDTSLEMIK 334 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |