CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.781e-13 Identity = 34/102 (33.33%), Postives = 60/102 (58.82%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 +A RVPT++V+ +DL+V ++K +E+ ++ ++G GI+ YTE +VS DF D S++ D +K + W DNEWG++ R++D + +A Sbjct: 233 IAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA 334
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_PROMH (D-erythrose-4-phosphate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=epd PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.938e-13 Identity = 34/104 (32.69%), Postives = 62/104 (59.62%), Query Frame = -2 Query: 366 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAKT 677 ++ RVPT++V+ +DL+V ++ + ++ I+ + G +GI+ YTE +VSTDF D S++ D + +K + W DNEWG++ R++D + +A T Sbjct: 233 ISVRVPTINVTAIDLSVTVKNAVNVLDVNKLIQKSATGAFRGIVDYTELPLVSTDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMAAT 336
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_PECCP (D-erythrose-4-phosphate dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=epd PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V + K + +EI A ++ + +GI+ YTE +VS DF D S++ D + +K + W DNEWG++ R++D Sbjct: 233 ISVRVPTINVTAIDLSVSVRKAVNVNEINALLQKSAHESFRGIVDYTELPLVSADFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLD 328
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_ERWT9 (D-erythrose-4-phosphate dehydrogenase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=epd PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 +A RVPT++V+ +DL+V + E+ A + + S G GI+ YTE +VS DF D S++ D + +K + W DNEWG++ R++D + +A Sbjct: 233 IAVRVPTINVTAIDLSVSVRDAVKASEVNALLHSASLGAFSGIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMIDTTLAMA 334
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_ERWCT (D-erythrose-4-phosphate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=epd PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13 Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 390 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVD 677 ++ RVPT++V+ +DL+V + K + +EI A ++ + +GI+ YTE +VS DF D S++ D + +K + W DNEWG++ R++D Sbjct: 233 ISVRVPTINVTAIDLSVSVRKAVNVNEINALLQKSAHESFRGIVDYTELPLVSADFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLD 328
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_CITK8 (D-erythrose-4-phosphate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=epd PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.423e-13 Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = -2 Query: 372 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIA 677 +A RVPT++V+ +DL+V ++K +E+ ++ + G GI+ YTE +VS DF D S++ D +K + W DNEWG++ R++D + +A Sbjct: 233 IAVRVPTINVTAIDLSVTVKKPVKANEVNQLLQKAAHGAFHGIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA 334
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAES (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV L+K D + D++ +A+K S+ GYTED++VS+D VG + S+FDA ++ ++ VK+ +WYDNE Y+ ++V + H+A+ Sbjct: 232 AQRVPVATGSLTELTVVLDKQDVTVDQVNSAMKQASDESF----GYTEDEIVSSDIVGMTYGSLFDATQTRVMTVGDRQLVKVAAWYDNEMSYTAQLVRTLAHLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV L+K D + D++ +A+K S+ GYTED++VS+D VG + S+FDA ++ ++ VK+ +WYDNE Y+ ++V + H+A+ Sbjct: 232 AQRVPVATGSLTELTVVLDKQDVTVDQVNSAMKQASDESF----GYTEDEIVSSDIVGMTYGSLFDATQTRVMTVGDRQLVKVAAWYDNEMSYTAQLVRTLAHLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_YERPS (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pseudotuberculosis GN=epd PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = -2 Query: 366 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAKT 677 ++ RVPT++V+ +DL+V + E+ ++ + G +GI+ YTE +VS DF D S++ D + +K + W DNEWG++ R++D + +AK+ Sbjct: 233 ISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMAKS 336
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_YERPN (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=epd PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12 Identity = 33/104 (31.73%), Postives = 60/104 (57.69%), Query Frame = -2 Query: 366 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAKT 677 ++ RVPT++V+ +DL+V + E+ ++ + G +GI+ YTE +VS DF D S++ D + +K + W DNEWG++ R++D + +AK+ Sbjct: 233 ISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMAKS 336 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |