CB304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++ RVPTV+V+ +DL+V + + ++I I S L I+ YTE +VS DF D S++ D + VK++ W DNEWG++ R++D + ++K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAMSK 339
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12 Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++ RVPTV+V+ +DL+V + + ++I I S L I+ YTE +VS DF D S++ D + VK++ W DNEWG++ R++D + ++K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALAMSK 339
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: E4PD_ALISL (D-erythrose-4-phosphate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11 Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 369 MAFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 677 ++ RVPTV+V+ +DL+V + + ++I I S+ L I+ YTE +VS DF D S++ D + VK++ W DNEWG++ R++D + + K Sbjct: 237 ISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASQCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANRMLDTALVMKK 339
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P_CLOPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Clostridium pasteurianum GN=gap PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEKDASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDA---KAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP SV +L L+K+ + +EI AA+K + GYTED++VS D VG S S+FDA K + VK VSWYDNE Y++++V + + AK Sbjct: 231 AQRVPVPTGSVTELISVLKKNVTVEEINAAMKEAANESF----GYTEDEIVSADVVGISYGSLFDATLTKIVDVDGSQLVKTVSWYDNEMSYTSQLVRTLEYFAK 331
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333
BLAST of CB304472 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11 Identity = 40/106 (37.74%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 369 AFRVPTVDVSVVDLTVRLEK-DASYDEIKAAIKAESEGKLKGILGYTEDDVVSTDFVGDSRSSVFDAKAGIALS---KKFVKLVSWYDNEWGYSTRVVDLIVHIAK 674 A RVP S+ +LTV LEK D + +++ A+K S GYTED++VS+D VG + S+FDA +S ++ VK+ +WYDNE Y+ ++V + ++A+ Sbjct: 232 AQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESF----GYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAE 333 The following BLAST results are available for this feature:
BLAST of CB304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 342
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304472 ID=CB304472; Name=CB304472; organism=Citrus sinensis; type=EST; length=678bpback to top |