CB304494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_JANSC (Nucleoside diphosphate kinase OS=Jannaschia sp. (strain CCS1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 284 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 634 R L G+I +FE+ G + K + + A+ Y S +PFFG L E++ S P+V + EGE + R ++GATNPA +APGTIR + A+ G N +HGSD+ E+A +EIA +F Sbjct: 17 RNLTGQIAAKFEEAGLRIVASKRIQLTLAQAQAFYGVHSERPFFGELCEFMISEPIVVQVLEGEDAIVKNREVMGATNPADAAPGTIRKEFALSIGENSVHGSDAPETAAEEIAFFF 133
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_HELHP (Nucleoside diphosphate kinase OS=Helicobacter hepaticus GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 284 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 634 +G++G+II RFE + +K + + R AE Y +PFF L++++ SGPVV M+ EG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 15 KGVIGKIIDRFESNNLRICAMKKLQLTRCDAEAFYAIHKERPFFKDLVDFMISGPVVVMVLEGNNAVMKNRDLMGATNPKEAEAGTIRADFAQSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_ACIAC (Nucleoside diphosphate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ndk PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.711e-21 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = -2 Query: 281 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 634 + ++G+I RFE G + ++ + R AE+ Y +PFF L++++ SGPV+ + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E++ +FP Sbjct: 17 KNVIGQIYARFEAAGLKIAAARMAHLSRQEAEQFYAVHKERPFFKDLVDFMISGPVMIQVLEGENAILKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVSFFFP 134
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_WOLWR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = -2 Query: 278 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 628 + G+I E G + K+M + + AE YE +PFFG L+E++TSG V+ + GE V R I+GATNP Q+ GTIRGD A N +HGSDS+E+A+KEIA +F + Sbjct: 19 ITGKINSYIESSGLKIIAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVIVQVLVGENAVSKYRQIMGATNPKQADKGTIRGDFADDISENRVHGSDSLENARKEIAFFFAE 135
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_SILST (Nucleoside diphosphate kinase OS=Silicibacter sp. (strain TM1040) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 284 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 634 R L G I +FE+ G + K + + + A K Y + +PF+ L E+++S PVV + EGEG + R I+GATNPA +APGTIR + A G N +HGSD+ E+A +EIA +F Sbjct: 17 RNLTGAINAKFEEAGLRIVAQKRIHMTKAQAGKFYAVHAERPFYDELCEFMSSAPVVVQVLEGEGAIAKNREIMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAEEIAYFF 133
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_RHIEC (Nucleoside diphosphate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 54/122 (44.26%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 269 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 634 R L G I E G + K + + R AE Y +PFFG L+E +TSGP V + EGEG + R I+GATNPA +A GTIR A+ G N +HGSD+ E+A +EI WF D I Sbjct: 17 RNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAQEIKYWFSDTEI 138
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PARDP (Nucleoside diphosphate kinase OS=Paracoccus denitrificans (strain Pd 1222) GN=ndk PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.459e-21 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 284 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 634 R L G+I +FE+ G + K + + A + Y + +PF+G L E++TS PVV + EGEG + R ++GATNPA + GTIR + A+ G N +HGSDS E+A +EIA +F Sbjct: 17 RNLTGKINAKFEEAGLRIVAQKRIQLTLAQAGQFYAEHKERPFYGELTEFMTSEPVVVQVLEGEGAILKNREVMGATNPANADEGTIRKEFALSVGENSVHGSDSPEAAAREIAFFF 133
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_VARPS (Nucleoside diphosphate kinase OS=Variovorax paradoxus (strain S110) GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = -2 Query: 284 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 634 + ++G+I+ RFE G + KL+ + R AE+ Y +PFF L++++ SGPV + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +F Sbjct: 17 KNVIGKIVSRFEAAGLKIVAAKLVHLSRNEAEQFYSVHKERPFFKDLVDFMISGPVFVQVLEGENAIAKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAANEVAFFF 133
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_CHLCV (Nucleoside diphosphate kinase OS=Chlamydophila caviae GN=ndk PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = -2 Query: 284 VGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 625 +GEI+ FEK GF + +K++ + AE Y S+PFF L++++ SGPVV M+ EG+ V R I+GATNP ++A GTIR G N +HGSDS+E+A EI +F Sbjct: 18 IGEIVAIFEKSGFRIAAMKMVHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEINYFF 131
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_WOLPM (Nucleoside diphosphate kinase OS=Wolbachia pipientis wMel GN=ndk PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.272e-20 Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = -2 Query: 278 LVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 628 + G I E+ G + K+M + + AE YE +PFFG L+E++TSG VV + GE V R I+GAT+P Q+ GTIRGD A N +HGSDS+E+A+KEIA +F + Sbjct: 19 ITGNINSYIEQSGLKITAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVVVQVLVGENAVSKYRQIMGATDPKQADKGTIRGDFADDISENRVHGSDSLENARKEIAFFFAE 135 The following BLAST results are available for this feature:
BLAST of CB304494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304494 ID=CB304494; Name=CB304494; organism=Citrus sinensis; type=EST; length=635bpback to top |