CB304494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.932e-39 Identity = 71/133 (53.38%), Postives = 101/133 (75.94%), Query Frame = -2 Query: 239 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 634 R L+G I+ RFE+KG++L KL+T+ + AE HY + +PFFG L+ +ITSGPV AM+WEGEGV+K R +IGATNP+++APGTIRGDLA+ G N++HGSDS ESA++EIA++F + +N +Q + W+ Sbjct: 15 RNLIGNIVSRFEQKGYTLAAAKLVTLSKETAETHYSEHRERPFFGELVSFITSGPVFAMVWEGEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGMNVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.932e-39 Identity = 78/134 (58.21%), Postives = 97/134 (72.39%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 634 RGLVGEII R+EKKGF L GLK + + AE HY + +PFFG L+ +ITSGPVVAM++EG+GVV + R +IG TNP SAPG+IRGD + GRNIIHGSDSVESA +EIALWF + + +P +YE Sbjct: 22 RGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.353e-38 Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 634 RGLVG II R E +G+ L GLKL+ V + AE HY + +PFF L+++ITSGPVVAM+W+G+GV+ R +IG TNP + PGTIRGD I GRN++HGSD E+AQ+EIALWF + +NW + WIYE Sbjct: 15 RGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_GEOKA (Nucleoside diphosphate kinase OS=Geobacillus kaustophilus GN=ndk PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.353e-38 Identity = 70/134 (52.24%), Postives = 99/134 (73.88%), Query Frame = -2 Query: 236 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIY 634 R L+GEI+ RFEKKGF L G KLM V R AE+HY + +PFFG L+++ITSGPV AM+WEGE V+ R ++G TNP ++APGTIRGD + G+N+IHGSDS +SA++EI+L+F + +++ ++ W+Y Sbjct: 16 RNLIGEIVARFEKKGFQLVGAKLMQVSRELAEQHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIAAARQMMGKTNPQEAAPGTIRGDFGLTVGKNVIHGSDSPQSAKREISLFFKEEELVSYSKQINAWLY 149
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.767e-38 Identity = 77/135 (57.04%), Postives = 96/135 (71.11%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 634 RGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+ GRN+IHGSD+ E+A+ EI LWF +N W S W E Sbjct: 16 RGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAWRVE 150
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.308e-38 Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 634 RGLVGEI+ RFE+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD+ E+A+ EI LWF +N W S W E Sbjct: 16 RGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTWRVE 150
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.014e-38 Identity = 72/135 (53.33%), Postives = 100/135 (74.07%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 634 RGLVGE+I R E+KG + +K++ + R AE HY + KPFF +L++YITSGPVVAM+ EG+ +K RT++GATNPA++APGTIRGD + GRN++H SDS +SA++EI+L+F D I NW+ + WIYE Sbjct: 15 RGLVGEVIGRLERKGLKIVAMKMLWIAREMAENHYAEHREKPFFSALVDYITSGPVVAMVVEGKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYE 149
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.141e-38 Identity = 75/132 (56.82%), Postives = 96/132 (72.73%), Query Frame = -2 Query: 242 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 634 RGL+GEI+ RFE+KGF L GLK +T R AE+HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI GRN+IHGSD+ E+AQ EI LWF + +W S W Sbjct: 17 RGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAQFEIGLWFQASELSDWTPSDQGW 148
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.715e-38 Identity = 72/133 (54.14%), Postives = 96/133 (72.18%), Query Frame = -2 Query: 239 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 634 R L+GEI+ RFEKKG+ L G KLMTV R AE+HY + +PFFG L+++ITSGPV AM+W+G V+ T R ++G TNP +A GTIRGD A G NIIHGSDS ESA++EI LWF + ++++ ++ WI Sbjct: 15 RNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 8.770e-38 Identity = 72/135 (53.33%), Postives = 98/135 (72.59%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 634 RGLV +I+ RFEKKG+ L +KL+ D E+HY + KPFF ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP SAPGTIRGD I GRN+ HGSDSV+SA++EI LWF + ++W+S+ WIYE Sbjct: 19 RGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153 The following BLAST results are available for this feature:
BLAST of CB304494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304494 ID=CB304494; Name=CB304494; organism=Citrus sinensis; type=EST; length=635bpback to top |