CB304494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_DESRM (Nucleoside diphosphate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=ndk PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.685e-37 Identity = 72/135 (53.33%), Postives = 102/135 (75.56%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 634 RGL+G+II +FE+KG+ + GLK+M + R AE+HY + + KPFF L+++ITSGPVVAM+ EG+ VV T R ++GATNP ++APGTIR + GRNIIHGSDS+ESAQ+EI ++F + I++ ++ WIYE Sbjct: 15 RGLIGQIISKFEQKGYKIVGLKMMQISREVAERHYGEHAGKPFFNGLVDFITSGPVVAMVIEGKDVVTTAREMMGATNPLKAAPGTIRATFGVDVGRNIIHGSDSLESAQREIGIFFKSEELIDYDRAIDTWIYE 149
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_BACHD (Nucleoside diphosphate kinase OS=Bacillus halodurans GN=ndk PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.685e-37 Identity = 71/133 (53.38%), Postives = 96/133 (72.18%), Query Frame = -2 Query: 239 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 634 R L+GEI+ RFEKKGF+L G KLMTV + AE HY + +PFFG L+++ITSGPV AM+WEGE V+ T R ++GATNPA + PGTIRGD + N+IHGSDS ESA++EI ++F +N + ++ W+ Sbjct: 15 RNLIGEIVSRFEKKGFTLIGAKLMTVTKEQAETHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGATNPADAEPGTIRGDFGVQVAMNVIHGSDSPESAKREIDIFFDSSELNEYDKVVNRWV 147
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PROM1 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL1A) GN=ndk PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 73/135 (54.07%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 634 RGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++A EI LWF + ++W S W E Sbjct: 17 RGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVVAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 71/134 (52.99%), Postives = 94/134 (70.15%), Query Frame = -2 Query: 236 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIY 634 R L+GEI+ RFE KG+ L G KLM V AE HY + +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD I G+NIIHGSDS ESA++EI L+F + I +++ + WIY Sbjct: 15 RELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 9.696e-37 Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 634 R LVGEI+ RFE+KGF L LKL+ +HY +L KPF+ L++Y++SGPVVAM+W+G VV R +IGAT+P + PGTIRGD + G+N+IHGSDSVESA +EIALWF + + W+ S W+YE Sbjct: 35 RRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELREKPFYSRLVKYMSSGPVVAMVWQGLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSVESAHREIALWFREAELLCWEDSAGHWLYE 169
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PROMT (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=ndk PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.266e-36 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 634 RGL+ EI+ RFE KGF L GLK +T + AEKHY +PFF L+++ITSGPV+AM+WEGEGV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++A EI LWF + ++W S W E Sbjct: 17 RGLIAEILGRFETKGFKLVGLKQLTPSKELAEKHYGVHKDRPFFSGLVDFITSGPVIAMVWEGEGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGSDTAVFEINLWFQENELVDWNPSDQAWRVE 151
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.654e-36 Identity = 74/135 (54.81%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 634 RGLVGEI+ RFE+KGF L GLK +T R A +HY +PFF L+++ITSGPV+AM+WEG+GV+ + R +IGAT P + PGTIRGDLA+ GRN+IHGSD ++AQ EI LWF +N W S W E Sbjct: 17 RGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.654e-36 Identity = 74/135 (54.81%), Postives = 94/135 (69.63%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 634 RGLVGEI+ RFE+KGF L GLK + R A +HY +PFF L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+ GRN+IHGSD ++AQ EI LWF +N W S W E Sbjct: 17 RGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVE 151
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.160e-36 Identity = 75/135 (55.56%), Postives = 92/135 (68.15%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 634 RGLVGEI+ RFE+KGF L GLK + + AEKHY +PFF L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I GRN+IHGSD E+A EI LWF + NW S W E Sbjct: 17 RGLVGEILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151
BLAST of CB304494 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.812e-36 Identity = 74/135 (54.81%), Postives = 96/135 (71.11%), Query Frame = -2 Query: 233 RGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 634 R LVGEII R EKKG L G K MTV + AE HY + + KPF+ L+ +ITS PV AM+ EGE VV+ R +IG TNP ++APGTIRGDL + GRN+IHGSDSVESA++EI+LWF ++ + ++ W+YE Sbjct: 15 RKLVGEIITRLEKKGLKLVGGKFMTVSKEKAETHYGEHADKPFYEGLVSFITSAPVFAMVVEGENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149 The following BLAST results are available for this feature:
BLAST of CB304494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304494 ID=CB304494; Name=CB304494; organism=Citrus sinensis; type=EST; length=635bpback to top |