CB304513

Overview
NameCB304513
Unique NameCB304513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:8..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.178e-39
Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = -2
Query:  217 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDE 597
            +NKITITNDKGRLSKE+IE+MVQEAEKYKAEDD  + KV AKN LE+YA+NM++T++DEK++ K+   DK+KI D   E I WLD NQ AE DE+  + KELE +CNPII K+YQ  G   G    E
Sbjct:  496 ENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQSAGGMPGGCQRE 622          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.178e-39
Identity = 76/130 (58.46%), Postives = 101/130 (77.69%), Query Frame = -2
Query:  226 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG------GGADAGAS 597
            +NKITITNDKGRLSK++I++MVQEAE+YK+ED+ ++ +V AKNALE+Y YN++ T++DEK+  K+   DK KI D  +E I WLD NQ+AE DE+E K KELE +CNPII+K+YQG      GG  +GAS
Sbjct:  501 ENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQGGPGGGSGGGGSGAS 630          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.151e-39
Identity = 82/148 (55.41%), Postives = 101/148 (68.24%), Query Frame = -2
Query:  160 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAG--ASMDEDXXXXXXXXXXXPKIEEVD 594
            NKITITNDKGRLSKEEIE+MV EAEKYK ED+E   +++AKN LE+YAYN+RNT+ D+K++ K+  ADK+ +  AI+E I WLDGNQ    DE+E K KELEG+ NPI+ K+Y   GGA  G     D             P IEEVD
Sbjct:  502 NKITITNDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDKVAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLYSAAGGAPGGMPGGFDPSGAPPPAADTTGPTIEEVD 649          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 4.151e-39
Identity = 74/125 (59.20%), Postives = 97/125 (77.60%), Query Frame = -2
Query:  223 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASM 597
            K KITITNDKGRLSKEEIEKMV +AEK+K +D++ K +VE+KN LENYA+ ++N+IKDEK++AK+  +DK  IE   E  ++WL+ NQ AE DE+EDKMK LE + NPI++K+YQ GG   G  M
Sbjct:  496 KQKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQEGGMPQGGGM 620          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 9.247e-39
Identity = 75/125 (60.00%), Postives = 100/125 (80.00%), Query Frame = -2
Query:  226 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGAS 597
            +NKITITNDKGRLSK++IE+MV EAEKYKA+D+  K ++ AKN LE+YA+N++ TI+DEK+  K+   DKKKIED  +E ++WLD NQ AE +EFE + K+LEG+ NPII+K+YQ  GGA  GA+
Sbjct:  499 QNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPPGAA 623          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.247e-39
Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = -2
Query:  247 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 594
            NKITITNDKGRLSKEEIE+MV +AEKYKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  ADKKKI +   EA+ WL+ NQLAE DEF+ K +ELE +CNPII K+YQGG
Sbjct:  501 NKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGG 616          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 597
            +NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  498 ENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 597
            +NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  498 ENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 597
            +NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  498 ENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 597
            +NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  498 ENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
The following BLAST results are available for this feature:
BLAST of CB304513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
HSP7C_ORYLA3.178e-3960.63Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP72_HUMAN3.178e-3958.46Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_BLAEM4.151e-3955.41Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HS7C1_DICDI4.151e-3959.20Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP7A_CAEEL9.247e-3960.00Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HS71L_PIG9.247e-3963.79Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP7C_SAGOE1.208e-3861.48Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT1.208e-3861.48Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB1.208e-3861.48Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_MOUSE1.208e-3861.48Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_H09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_H09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304513 ID=CB304513; Name=CB304513; organism=Citrus sinensis; type=EST; length=598bp
TTTTTTTTTTTTTTTTTTTTTTTTTGAAACATAATATCTTTATGCATACA
CCAGGAAACAGTATTTACATGTAACAGAAGCAGGAAAAGGAAGAAAAGAT
CACACTCCCAACTCAACCCCTAATCATTAAACAACATTAAGCATAAATCC
TCAAATTTAATCCACCTCCTCAATCTTGGGGCCAGCACCGCTACCAGCAC
CAGCAGAAGGACCATCCTCATCCATACTTGCACCAGCATCAGCTCCACCT
CCTTGGTACATCTTGGCAATAATTGGGTTGCAGATGCCCTCCAGCTCTTT
CATCTTATCTTCAAACTCATCTGCCTCTGCGAGCTGGTTCCCGTCAAGCC
ATTGGATGGCCTCCTCAATGGCATCTTCAATTTTCTTCTTGTCAGCAGTG
GGAAGCTTTGCGCTGATCTTTTCATCCTTGATTGTGTTTCTCATGTTGTA
AGCATAATTCTCGAGAGCATTCTTGGCCTCCACCTTTTTCTTGTGCTCGT
CATCCTCGGCCTTGTATTTTTCTGCCTCTTGTACCATCTTCTCTATCTCC
TCCTTAGAGAGTCTGCCCTTGTCATTTGTGATGGTAATCTTATTCTTC
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