CB304513

Overview
NameCB304513
Unique NameCB304513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:8..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 70/128 (54.69%), Postives = 102/128 (79.69%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 591
            KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNMRN I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++++K+KE+E +CNPII  +YQ  GGA  GAS + +
Sbjct:  532 KITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGASEESN 659          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 67/133 (50.38%), Postives = 103/133 (77.44%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ------GGGADAGASMDED 591
            KITITN+KGRLS+EEI++MV+EAE++  ED + K++++A+N LE Y YNM+NT+ D +K++ KL   +K+K+E+A++EA++WLD NQ AE +++E+K+KE+E +CNPI++ +YQ      GG AD G   D D
Sbjct:  529 KITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDHD 661          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP2_MAIZE (Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 6.203e-35
Identity = 67/133 (50.38%), Postives = 103/133 (77.44%), Query Frame = -2
Query:  214 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ------GGGADAGASMDED 591
            KITITN+KGRLS+EEI++MV+EAE++  ED + K++++A+N LE Y YNM+NT+ D +K++ KL   +K+K+E+A++EA++WLD NQ AE +++E+K+KE+E +CNPI++ +YQ      GG AD G   D D
Sbjct:  529 KITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNQLETYVYNMKNTVGDKDKLADKLEAEEKEKVEEALKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIVSAVYQRSGGAPGGDADGGVDDDHD 661          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.101e-35
Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = -2
Query:  229 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 594
            NKI ITNDKGRLSKEEIE+M+ EAEKYKAED+    ++ AKN LE+YAY++RNTI D K+  KL  +DK+K++  I++ + WLD NQ A  +EFE + KELE + NPI+ K Y G G + GA
Sbjct:  498 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY-GAGGEGGA 618          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.058e-34
Identity = 67/123 (54.47%), Postives = 99/123 (80.49%), Query Frame = -2
Query:  226 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 591
            KITITNDKGRLS+EEIE+MV+EAE++  ED + K+K++A+N+LE Y YNM+N I D +K++ KL + +K+KIE A++EA++WLD NQ AE +++++K+KE+E +CNPII  +YQ  G  +G S
Sbjct:  532 KITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGPSGES 654          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.357e-34
Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = -2
Query:  226 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGAS 594
            NKITITNDKGRLSKE+IE+M+ +AEKYKAED+    +++AKN LE+YAY+++NTI + ++  ++   DKKK+ D I+E I WLD NQ AE DE+E + KELEG+ NPII+  Y   GGA  GA+
Sbjct:  497 NKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAYAAAGGAPGGAA 618          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.078e-34
Identity = 69/123 (56.10%), Postives = 96/123 (78.05%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAG 597
            K+KITITNDKGRL+ E+IEKMV++AE +KA+D+  ++ VE+KN LENYAY +R+TIKD+KI+AKL   D+K +E+  +EAI WL  N  A  +E+E  MK+LE +C+PII+K+Y Q GG + G
Sbjct:  497 KHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVYGQQGGENPG 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 61/122 (50.00%), Postives = 93/122 (76.23%), Query Frame = -2
Query:  223 ITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASM 588
            +TITNDKGRLS+EEI++MV+EAEKYK ED++ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I +A++W++ NQLAE DE+EDK+K +EG+CNP++ K+YQ G A  G  M
Sbjct:  502 VTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQSGAAPGGPDM 623          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 597
            +N+ITITNDKGRLSK+EIE+MV +A KY+A+D   + +VEAKN LENYAY+M+NT+ D  +S KL  +DK  +   I+  ++WL  NQ A  +E+E K KELE +CNPI+ KMYQ  GGA  G
Sbjct:  500 RNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGGG 622          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 8.956e-34
Identity = 70/122 (57.38%), Postives = 91/122 (74.59%), Query Frame = -2
Query:  229 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGA 591
            KITITNDKGRLSKEEI+KMV EAEK+K ED++   +V+AKN LE+YAY+++NTI D ++  K+   DK+K+  AI+E I WLD +Q A  +E+EDK KELE + NPII+  Y   GGA  GA
Sbjct:  499 KITITNDKGRLSKEEIDKMVSEAEKFKEEDEKEAARVQAKNQLESYAYSLKNTINDGEMKDKIGADDKEKLTKAIDETISWLDASQAASTEEYEDKRKELESVANPIISGAYGAAGGAPGGA 620          
The following BLAST results are available for this feature:
BLAST of CB304513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
BIP5_TOBAC6.203e-3554.69Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP3_MAIZE6.203e-3550.38Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
BIP2_MAIZE6.203e-3550.38Luminal-binding protein 2 OS=Zea mays GN=BIPE2 PE=... [more]
HSP72_PARBA8.101e-3556.56Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
BIP_SPIOL1.058e-3454.47Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
HSP70_EMENI2.357e-3456.45Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HS7C2_DICDI3.078e-3456.10Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_THEAN5.251e-3450.00Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_LEIDO5.251e-3455.28Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP71_CANAL8.956e-3457.38Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_H09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_H09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304513 ID=CB304513; Name=CB304513; organism=Citrus sinensis; type=EST; length=598bp
TTTTTTTTTTTTTTTTTTTTTTTTTGAAACATAATATCTTTATGCATACA
CCAGGAAACAGTATTTACATGTAACAGAAGCAGGAAAAGGAAGAAAAGAT
CACACTCCCAACTCAACCCCTAATCATTAAACAACATTAAGCATAAATCC
TCAAATTTAATCCACCTCCTCAATCTTGGGGCCAGCACCGCTACCAGCAC
CAGCAGAAGGACCATCCTCATCCATACTTGCACCAGCATCAGCTCCACCT
CCTTGGTACATCTTGGCAATAATTGGGTTGCAGATGCCCTCCAGCTCTTT
CATCTTATCTTCAAACTCATCTGCCTCTGCGAGCTGGTTCCCGTCAAGCC
ATTGGATGGCCTCCTCAATGGCATCTTCAATTTTCTTCTTGTCAGCAGTG
GGAAGCTTTGCGCTGATCTTTTCATCCTTGATTGTGTTTCTCATGTTGTA
AGCATAATTCTCGAGAGCATTCTTGGCCTCCACCTTTTTCTTGTGCTCGT
CATCCTCGGCCTTGTATTTTTCTGCCTCTTGTACCATCTTCTCTATCTCC
TCCTTAGAGAGTCTGCCCTTGTCATTTGTGATGGTAATCTTATTCTTC
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