CB304513

Overview
NameCB304513
Unique NameCB304513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:8..604. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = -2
Query:  244 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 594
            NKITITNDKGRLSKEEIE+M+ EAEKYKAED+    +++AKN LE+YAY+++NTI + K+  ++   DKKKIED I E I WLD NQ AE DE+E + KELE I NPI+   Y   G
Sbjct:  367 NKITITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAYGAAG 481          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33
Identity = 66/122 (54.10%), Postives = 89/122 (72.95%), Query Frame = -2
Query:  232 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG-GADAG 594
            NKI ITNDKGRLSKEEIE+M+ EAEKYKAED+    ++  KN LE+YAY++RN+++  K+  KL   DK+K++  I++ +QWLD NQ A  +E+E + KELE + NPI+ K Y GG GA  G
Sbjct:  498 NKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEIDKTVQWLDENQTATKEEYESQQKELEAVANPIMMKFYAGGEGAPGG 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.528e-33
Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = -2
Query:  223 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASM 597
            +N+I +TNDKGRLS+ EIE+MV+EA KY+AED +  ++++AKN LENYA++M+N + D  ++ K+  ADKK I  A+EEA++WL+ NQ A  +E+E + KELE +C PI+  MYQG    AGA M
Sbjct:  501 RNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQG---MAGAGM 622          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33
Identity = 67/126 (53.17%), Postives = 91/126 (72.22%), Query Frame = -2
Query:  217 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDE 594
            NKITITNDKGRLSK++I++MV EAEKY+A+D+   ++V+AKN LE+YA+ ++NTI +     K+   D K++E A +E I WLD +Q A  DE++D+ KELEGI NPI+ K Y G GA AG    E
Sbjct:  497 NKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY-GAGAGAGPGAGE 621          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 4.445e-33
Identity = 66/122 (54.10%), Postives = 90/122 (73.77%), Query Frame = -2
Query:  226 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 591
            KITITNDKGRLSKEEIEKMV EAEK+K ED++   +V+AKN LE+YAY+++NT+ +E+  +KL  ++ +++  A +E I WLD NQ A  +EF D+ KELE   NPI+ K YQ G   +GA+
Sbjct:  498 KITITNDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKAADETIAWLDSNQTATQEEFADQQKELESKANPIMTKAYQAGATPSGAA 619          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.445e-33
Identity = 67/123 (54.47%), Postives = 98/123 (79.67%), Query Frame = -2
Query:  229 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGA 591
            KITITN+KGRLS+EEI++MV+EAE++  ED + K+K++A+NALE Y YNM+N + D +K++ KL   +K+KIE A +EA++WLD NQ +E +E+++K+KE+E +CNPII  +YQ  GGA  GA
Sbjct:  531 KITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGA 653          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 140.584 bits (353), Expect = 5.805e-33
Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = -2
Query:  226 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 594
            NKITITNDKGRLSKE+IEKMV EAEK+K ED++  +++ +KN LE+ AY+++NTI +     KL  ADK  +    EE I WLD N  A  +EF+DK+KEL+ I NPI++K+YQ GGA  GA+
Sbjct:  496 NKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQAGGAPGGAA 616          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.805e-33
Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = -2
Query:  232 KNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 597
            +N ITITNDKGRLSK+EIE+MV +A KY+  D   +  +EAKN LENYAY+M+NT+ D  +S KL  +D+  +  AI+ A++WL+ NQ A  +E+E + KELE  CNPI+ KMYQ  G  AG
Sbjct:   75 RNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQSMGGGAG 196          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 7.582e-33
Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = -2
Query:  229 NKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 594
            NKITITNDKGRLSKE+I+KMV EAEK+KAED++  ++V+AKN LE+YA+ ++N++ +     K+   D +K+E A ++AI WLD +Q A  +E++++ KELEG+ NPI++K Y   G   GA
Sbjct:  497 NKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKVGEEDARKLEAAAQDAINWLDASQAASTEEYKERQKELEGVANPIMSKFYGAAGGAPGA 618          
BLAST of CB304513 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.582e-33
Identity = 65/122 (53.28%), Postives = 96/122 (78.69%), Query Frame = -2
Query:  229 KITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 591
            KITITN+KGRLS+EEI++MV+EAE++  ED + K+K++A+NALE Y YNM+N + D +K++ KL   +K+KIE A +EA++WLD NQ +E +E+++K+KE+E +CNPII  +YQ  G   GA
Sbjct:  531 KITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGA 652          
The following BLAST results are available for this feature:
BLAST of CB304513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
HSP70_PENCI1.170e-3359.83Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_AJECA1.170e-3354.10Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP70_TRYCR1.528e-3352.00Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP73_YEAST1.995e-3353.17Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP72_CANAL4.445e-3354.10Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
BIP1_ARATH4.445e-3354.47Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP71_YEAST5.805e-3355.28Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_LEIBR5.805e-3353.28Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP74_YEAST7.582e-3350.82Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
BIP2_ARATH7.582e-3353.28Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_H09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_H09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304513 ID=CB304513; Name=CB304513; organism=Citrus sinensis; type=EST; length=598bp
TTTTTTTTTTTTTTTTTTTTTTTTTGAAACATAATATCTTTATGCATACA
CCAGGAAACAGTATTTACATGTAACAGAAGCAGGAAAAGGAAGAAAAGAT
CACACTCCCAACTCAACCCCTAATCATTAAACAACATTAAGCATAAATCC
TCAAATTTAATCCACCTCCTCAATCTTGGGGCCAGCACCGCTACCAGCAC
CAGCAGAAGGACCATCCTCATCCATACTTGCACCAGCATCAGCTCCACCT
CCTTGGTACATCTTGGCAATAATTGGGTTGCAGATGCCCTCCAGCTCTTT
CATCTTATCTTCAAACTCATCTGCCTCTGCGAGCTGGTTCCCGTCAAGCC
ATTGGATGGCCTCCTCAATGGCATCTTCAATTTTCTTCTTGTCAGCAGTG
GGAAGCTTTGCGCTGATCTTTTCATCCTTGATTGTGTTTCTCATGTTGTA
AGCATAATTCTCGAGAGCATTCTTGGCCTCCACCTTTTTCTTGTGCTCGT
CATCCTCGGCCTTGTATTTTTCTGCCTCTTGTACCATCTTCTCTATCTCC
TCCTTAGAGAGTCTGCCCTTGTCATTTGTGATGGTAATCTTATTCTTC
back to top