CB304514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.235e-38 Identity = 72/111 (64.86%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH +++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_BOVIN (60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.235e-38 Identity = 72/111 (64.86%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH +++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.613e-38 Identity = 68/111 (61.26%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH + + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK WQN++ LY+K++MGPS+R++ Sbjct: 107 YDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.694e-38 Identity = 72/111 (64.86%), Postives = 96/111 (86.49%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH +SL+SK +E +ATVKFQ+KKVLC+ VAVG++ + ++++ N+ +S+NFLVSLLKKNWQNVR L +KSTMG R++ Sbjct: 106 YDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_CHLRE (60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.130e-38 Identity = 78/111 (70.27%), Postives = 91/111 (81.98%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 YHAFLAS+SVIKQIPRLLGPGLNKAGKFP + K+LE V +TK ++KFQLKKVLCMGVAV N+ M E +I N+ ++NFLVSLLKKNWQNVRCLY+KSTMG RI+ Sbjct: 105 YHAFLASDSVIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 213
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.784e-37 Identity = 70/111 (63.06%), Postives = 95/111 (85.59%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AFLASES+IKQIPR+LGPGLNKAGKFP+ +TH +++ +KV+E K+T+KFQ+K+VLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_NEUCR (60S ribosomal protein L10a OS=Neurospora crassa GN=rpl-10a PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.575e-36 Identity = 70/111 (63.06%), Postives = 91/111 (81.98%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AF+ASE++IKQIPRLLGPGL+KAGKFPT V+H L K+NE K+T+KFQLKKVLCMGVAVGN+ M ++Q+ N+ +++N+LVSLLKK WQNV L +K+TM P R++ Sbjct: 107 YDAFVASEALIKQIPRLLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLVSLLKKGWQNVGSLTIKATMSPPKRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_ASHGO (60S ribosomal protein L10a OS=Ashbya gossypii GN=RPL10A PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.669e-35 Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H L SKV + ++T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKNWQNV L +KSTMGP+ R++ Sbjct: 107 YNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.847e-35 Identity = 69/111 (62.16%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ ++VNFLVSLLKK WQN+ L +KSTMG +R++ Sbjct: 106 YDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216
BLAST of CB304514 vs. ExPASy Swiss-Prot
Match: RL10A_CANGA (60S ribosomal protein L10a OS=Candida glabrata GN=RPL10A PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.857e-35 Identity = 70/111 (63.06%), Postives = 89/111 (80.18%), Query Frame = -2 Query: 211 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQKSLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 543 Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H L KV + ++T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKNWQNV L +KSTMGP+ R++ Sbjct: 107 YNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217 The following BLAST results are available for this feature:
BLAST of CB304514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304514 ID=CB304514; Name=CB304514; organism=Citrus sinensis; type=EST; length=604bpback to top |