CB304548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.007e-20 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 107 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 4.007e-20 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 107 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.007e-20 Identity = 44/56 (78.57%), Postives = 52/56 (92.86%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYL+IKGLLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 107 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19 Identity = 40/53 (75.47%), Postives = 51/53 (96.23%), Query Frame = -1 Query: 222 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 380 ANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W Sbjct: 103 ANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.431e-19 Identity = 40/53 (75.47%), Postives = 51/53 (96.23%), Query Frame = -1 Query: 222 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQW 380 ANYL+IK LLD+TC+TVA+MI+GKTPEEIRK FNIKNDF+P+EEE++R+EN+W Sbjct: 103 ANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19 Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYLNIKGLLDL+ QTVAD IK KTPEEIR+ FNI+NDF+P+EE VR+EN WAFE Sbjct: 94 ANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: ASK13_ARATH (SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.557e-19 Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYLNIK LLDL CQTVADMI GK P+EIR I+NDF+P+EEEE+R+ENQWAFE Sbjct: 99 ANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE 154
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.684e-18 Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYLNI GLLDLTC+ VAD ++GKTPE++R FNIKND++P+EE EVR EN+WAFE Sbjct: 108 ANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.872e-18 Identity = 39/56 (69.64%), Postives = 49/56 (87.50%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYLNI GLLDLTC+ VAD ++GKTP ++R+ FNIKND++P+EE EVR EN+WAFE Sbjct: 108 ANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CB304548 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.398e-18 Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = -1 Query: 213 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 380 ANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND +P+EE +RREN+WAFE Sbjct: 98 ANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153 The following BLAST results are available for this feature:
BLAST of CB304548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304548 ID=CB304548; Name=CB304548; organism=Citrus sinensis; type=EST; length=380bpback to top |