CB304552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 2.232e-52 Identity = 90/124 (72.58%), Postives = 106/124 (85.48%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP HFDMAEPAF +IAQ RAG+VP+ +RR+ CAK+GGIRFT+ GHSYFNLVLVTNVGGAGDV +VS+KGS++GWQAMS NWG NWQ+ +GQ L F+VTASDGRTVTS+NV P+ W Sbjct: 114 GGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGW 237
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 4.209e-51 Identity = 89/130 (68.46%), Postives = 110/130 (84.62%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG------WQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP +HFD+AEPAFL+IA++ AGIVP+SFRR+ CA+KGG+RFTVNGH+YFNLVLVTNVGGAGDV S+++KGS +G WQ MSRNWGQNWQSN Y +G++L F+VTA DGR++T +V PA W Sbjct: 119 GGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGW 248
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 4.209e-51 Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFD+A P FL+IA+YRAGIVPIS+RR+ C K GGIRFT+NGH YFNLVL+TNV GAGD+ S+KGSKTGW +++RNWGQNWQSN GQSL F+VT+SD RT TS N+ P+NW Sbjct: 123 NGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNW 247
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.497e-51 Identity = 89/125 (71.20%), Postives = 102/125 (81.60%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP +HFD+A P FL IA+Y+AGIVP+S+RRIPC KKGGIRFT+NG YFNLVLVTNV GAGDV VS+KGS T W +SRNWGQNWQSN GQSL F+V SDGR+ TSNN+ P+NW Sbjct: 121 NGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNW 245
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 7.938e-50 Identity = 85/124 (68.55%), Postives = 103/124 (83.06%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP QHFDMAEPA+L+I Y GIVP+ ++R+PCAK+GG+RFT+NG YF LVLV+NVGG G + SVSIKGS+TGW AMSRNWG NWQSN Y +GQSL F+VT+SDG+T+T +V PA W Sbjct: 125 GGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGW 248
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.309e-49 Identity = 89/125 (71.20%), Postives = 101/125 (80.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP +HFD+A P FL+I YRAGIVP+S+RR+PC K GGIRFTVNG YFNLVLVTNV GAGD++ VS+KGSKT W MSRNWGQNWQSN GQSL F+VTASD R+ TS NV PA W Sbjct: 125 DGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATW 249
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.016e-49 Identity = 85/125 (68.00%), Postives = 98/125 (78.40%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFD+A P FL IA+YRAGIVP+S+RR+PC KKGG+RFT+NG YFNLVL+TNV GAGD+ S+KG+ TGW MSRNWGQNWQSN GQ+L F+VT SD RT TS N PA W Sbjct: 127 NGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGW 251
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 3.939e-49 Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDM++P F +IA ++AGIVP+S+RR+ C KKGGIRFT+NGHSYFNLVLVTNVGGAGDVH+V++K ++ WQA+SRNWGQNWQS +GQ+L F+VT DGR+V SNN VP W Sbjct: 154 DGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGW 279
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 192.971 bits (489), Expect = 5.145e-49 Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFD+A P FL+IA+YRAGIVP+SFRR+PC K+GGIRFT+NG YFNLVLVTNV GAG++ + +KG+ T W MSRNWGQNWQSN GQSL F+VT+SD R+ TS N+ PANW Sbjct: 120 NGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANW 244
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.955e-48 Identity = 83/127 (65.35%), Postives = 105/127 (82.68%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIK---GSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPPL HFD+++PAFL+IA++++GIVP+S+RR+ C +KGG+RFT+NGHSYFNLVLV+NVGGAGDVH+V++K G K WQAM+RNWGQNWQS +GQ+L F VT D R+V S NV PA W Sbjct: 126 GGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGW 252 The following BLAST results are available for this feature:
BLAST of CB304552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304552 ID=CB304552; Name=CB304552; organism=Citrus sinensis; type=EST; length=455bpback to top |