CB304552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.772e-41 Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G + S+ I GS T W M RNWG NW S Y GQ+L F+VT DG+T+ N+VP+ W Sbjct: 124 NGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGW 249
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 3.023e-41 Identity = 73/126 (57.94%), Postives = 91/126 (72.22%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGS-KTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFDMA+PA+ +I YRAGI+P+ ++R+PC KKGG+RFT+NGH YFNLVLVTNV G + S+ + GS T W M RNWG NW S Y GQ L F+VT DG+T+ N+VP+ W Sbjct: 142 NGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 5.157e-41 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 GGWCNPP +HFDM++PA+ IA Y +GIVP+ + R PC + GGIRF + GH Y+ LVLVTNV G+G V + +KGS T W +MSRNWG+NWQSN Y GQ+L F+V A DG VT+ +V PANW Sbjct: 117 GGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANW 240
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 1.960e-40 Identity = 71/126 (56.35%), Postives = 89/126 (70.63%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 NGGWCNPP HFDMA+PA+ +I Y AGI+P+ ++R+PC KKGG+RFT+NGH YF LVLVTNV AG + S+ + GS T W M+RNWG W S Y GQ L F+VT +D +T+ NVVP W Sbjct: 129 NGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.559e-40 Identity = 70/126 (55.56%), Postives = 92/126 (73.02%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKT-GWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMA+PA+ +I YR GI+P+ ++R+PC KKGG+RFT+NGH YF LVL+TNVG AG + ++ +KGSK+ W AM+ NWG W S Y GQ L F+VT +DG+T+ NVV W Sbjct: 124 SGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGW 249
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 9.726e-40 Identity = 69/125 (55.20%), Postives = 97/125 (77.60%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDM++PA+ I YRAGIVP+ ++++ C ++GG+RFTV+G +YF LVL+TNV G+G V ++S+KGSKTGW ++RNWG NWQ N GQ+L F+VT++ G+T+ N+VVP W Sbjct: 117 DGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALSFRVTSTGGQTLQINSVVPEWW 241
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 1.270e-39 Identity = 70/125 (56.00%), Postives = 94/125 (75.20%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMAEPA+LQI Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVL++NV G+G + SV +KG T +SRNWG NWQS+ GQ+L F VT++ G+T+ N+VPA W Sbjct: 122 DGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 1.659e-39 Identity = 70/125 (56.00%), Postives = 95/125 (76.00%), Query Frame = -2 Query: 80 NGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 454 +GGWCNPP HFDMAEPA+LQI Y+AGI+P+ ++++ C ++GGIRFT+ G ++F LVLV+NV G+G V SVS+KG TGW ++RNWG NWQ N GQ+L F VT++ G+T+ NVVP+ W Sbjct: 117 SGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWW 241
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + GQ + F+VT SDG T NNV+P NW Sbjct: 141 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 264
BLAST of CB304552 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = -2 Query: 80 GGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLVTNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNFYFNGQSLFFQVTASDGRTVTSNNVVPANW 451 G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD+ + +KG KTGW M +NWGQNW + GQ + F+VT SDG T NNV+P NW Sbjct: 134 GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNW 257 The following BLAST results are available for this feature:
BLAST of CB304552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304552 ID=CB304552; Name=CB304552; organism=Citrus sinensis; type=EST; length=455bpback to top |