CB304567

Overview
NameCB304567
Unique NameCB304567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:158..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 59/133 (44.36%), Postives = 83/133 (62.41%), Query Frame = -2
Query:  210 HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALKVKAANVESGGDFPVSSADDILKAL 608
            H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS NDPFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ + LKV+   ++  G+   SSA  +L  L
Sbjct:   35 HERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 59/130 (45.38%), Postives = 83/130 (63.85%), Query Frame = -2
Query:  210 KKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALK-VKAANVESGGDFPVSSADDILKAL 590
            KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L IS NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:   38 KKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = -2
Query:  210 KKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALK-VKAANVESGGDFPVSSADDILKAL 590
            KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L I+ NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:   38 KKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PRDX5_MOUSE (Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.232e-21
Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = -2
Query:  210 QQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALMVDALKVKAANVE-SGGDFPVSSADDILKAL 623
            ++V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV++ W +       V+ LAD +  +  A  L LD S   L    R +RF++++D   VKA NVE  G     S A +IL  L
Sbjct:   70 KKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 210          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: Y1621_SYNY3 (Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803) GN=sll1621 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21
Identity = 56/142 (39.44%), Postives = 86/142 (60.56%), Query Frame = -2
Query:  210 SVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALKVKAANVES--GGDFPV-----SSADDILKAL 614
            +   +  GKKV+LF +PGAFTPTCS  H+P + +  +E ++  VD+I+C+SVND FVM  W K    +K VK L DG+ ++T  +G+ ++ S  G G RS R+++ V+  K++   +E   G + PV     S AD +L  L
Sbjct:   32 TTEQIFGGKKVVLFSLPGAFTPTCSSNHLPRYEQLFEEFQALGVDDIICLSVNDAFVMFQWGKQIGADK-VKLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMFVNDGKIEKMFIEPEFGDNCPVDPFECSDADTMLAYL 172          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PRX5_HAEIN (Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influenzae GN=HI0572 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.102e-21
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = -2
Query:  210 DQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALKVKAANV---ESGGDFPVSSADDILKAL 632
            D+   V+   L   K VI+F +PGAFTPTCS  H+P + E A   K   VD+IL +SVND FVM AW K   +++++ F+ DG+ ++T  +G+ +   + G G RS R++++V    V+   +   E G  F VS AD +LK L
Sbjct:   20 DKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAW-KEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 162          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21
Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = -2
Query:  210 EQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALMVDALKVKAANVE-SGGDFPVSSADDILKAL 638
            E++   +V++  L  GKK +LFG+PGAFTP CS  H+PGF+E+AD LK+K +  + C++VND FV + WA+       V+ LAD S  +     L LD S   L    R +RF+++++   VK+ NVE  G     S A +IL  L
Sbjct:   74 EKEPGNKVNLAELFKGKKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.779e-20
Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = -2
Query:  219 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALMVDALKVK--AANVESGGDFPVSSADDIL 593
            GKKV++  +PGA+TP C  +H+P  +++ DELK+K VD +  I+ NDPFVM AW         V F  D    ++ ALG  +DLS K  G R+ R+AL++D  K+   A++    G    +S D IL
Sbjct:   48 GKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALIIDDNKIVDFASDEGDTGKLQNASIDTIL 174          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 3.035e-20
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = -2
Query:  252 QVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALMVDALKVKAANVESGG 620
            +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V    VKA NVE  G
Sbjct:   75 KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDG 199          
BLAST of CB304567 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = -2
Query:  252 QVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALMVDALKVKAANVESGG 620
            +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V    VKA NVE  G
Sbjct:   76 KVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDG 200          
The following BLAST results are available for this feature:
BLAST of CB304567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
MALF3_MALFU1.837e-2544.36Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PMPA_CANBO6.533e-2345.38Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PMPB_CANBO1.455e-2244.62Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRDX5_MOUSE1.232e-2142.55Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=... [more]
Y1621_SYNY31.609e-2139.44Putative peroxiredoxin sll1621 OS=Synechocystis sp... [more]
PRX5_HAEIN2.102e-2139.58Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influen... [more]
PRDX5_BOVIN4.682e-2140.41Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
MALF2_MALFU1.779e-2040.16Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]
PRDX5_HUMAN3.035e-2043.20Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PRDX5_CERAE3.964e-2043.20Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_F10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_F10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304567 ID=CB304567; Name=CB304567; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACAAAAACACACCCTTT
ATTCCGATAAAGATGAACAACAGTTTAAACAAAAGACTTCTCGCGTCATA
CATAACAATATTCGAGATCCACTGGTTTATATTCATCCTAAGCATAGCAC
AGCATAAGGAAGTAATAACTCAACCAACACTAAGCAGCTGGGATGGAACT
GCAAATTTAAAGAGCCTTGAGGATGTCATCAGCACTGGAGACTGGGAAAT
CTCCACCAGATTCAACATTTGCGGCCTTCACCTTGAGGGCATCAACCATG
AGAGCAAACCTCCTTGACCGGGTGCCAAGTCCTTTCTCACTGAGGTCAAG
CTCAAGCCCCAAAGCATGGGTGTATTTTGCTGAGCCATCAGCCAGGAACT
TCACGCTCTTGTTCTCAGGAAATGTTTTGGCCCATGCCTTCATCACAAAT
GGGTCATTAACGCTTATGCAGAGAATTTCATCGACGTCTTTTGACTTCAA
CTCATCAGCCTTCTCGATGAATCCAGGCACATGCTTCAAGCTGCAAGTAG
GAGTGAAAGCACCGGGGACGCCAAAGAGGATGACCTTTTTACCGGCAGCG
AGCGAGTGTACGGACACTTGCTGCAACTGATCTTGTTCGTCGAAGTAAGC
GAGAATA
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