CB304568

Overview
NameCB304568
Unique NameCB304568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:578..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26
Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = -2
Query:  132 LKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYITRFFTKQLDGK 701
            + EVP++    RK   E+   +++L E L  +LCE LGL+   LK   +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+     WVDV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+SIA F++P   D++  P P L+    EK   + +F   DY+  +   +   K
Sbjct:  106 ISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGN-RMSIASFYNPGS-DAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEK 302          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.951e-26
Identity = 70/186 (37.63%), Postives = 108/186 (58.06%), Query Frame = -2
Query:  165 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYI 704
            E+ ++ E  RK   E+   +++L E L  +LCE LGL+   LK+  +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    EW+DV PV  ++VIN+GD +++++N +Y S+ HRV+A S    R+SIA F++P + D+   P P L+    E    + +F   DY+
Sbjct:  102 EIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSD-GTRMSIASFYNPGD-DAFISPAPALLEEKSEVSPTYPKFLFDDYM 285          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.300e-25
Identity = 71/190 (37.37%), Postives = 108/190 (56.84%), Query Frame = -2
Query:  129 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGL-KTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKT 689
            PE  R     ++  +  LG  L  VL E +GL K D  K    +E ++++ +YYP CPQPDLT+G+  HTDPG +TILLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P++   +Y P  ++   EK       T+ +   +  TK ++  T
Sbjct:  151 PEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLI-NYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNST-SSRLSIATFQNPAQNAIVY-PL-KIREGEKAILDEAITYAEMYKKCMTKHIEVAT 336          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.697e-25
Identity = 72/194 (37.11%), Postives = 112/194 (57.73%), Query Frame = -2
Query:  165 LTEPELKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYI 716
            L +  + EVP++    R    E+   +++L E L  +LCE LGL+   LK+  +       G     YP CP P+L  G+ +HTD G L +L QDDK  GLQ+    +W+DV P+  ++VIN+GD L++++N +Y SVEHRV+A +    R+SIA F++P   D++  P P L+   + EK   + +F   DY+
Sbjct:   95 LPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTD-GTRMSIASFYNPGS-DAVIYPAPTLVEKEAEEKNQVYPKFVFEDYM 286          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.895e-25
Identity = 70/186 (37.63%), Postives = 107/186 (57.53%), Query Frame = -2
Query:  165 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYI 704
            E+ ++ E  RK   E+   +++L E L  +LCE LGL+   LK+  +       G     YP CP+PDL  G+ +H+D G + +L QDDK  GLQ+    EWVDV P+  ++VIN+GD +++++N +Y SV HRV+A S    R+SIA F++P   DS   P P ++    E    + +F   DY+
Sbjct:  102 EIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSD-GTRMSIASFYNPG-NDSFISPAPAVLEKKTEDAPTYPKFVFDDYM 285          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = -2
Query:  237 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI--KHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLY 689
            PE   K   E++  +  L   L  VL E +GL+ + L        + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ    +G+ W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P+   ++Y
Sbjct:  150 PEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPDATVY 301          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 67/169 (39.64%), Postives = 100/169 (59.17%), Query Frame = -2
Query:  165 EWNHHVKQLGELLFGVLCEGLGLKTDRL-KEKTFLEGRM--MVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662
            E+   +++L   +  VL  GLGL   RL KE   LE  +  M  +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP ++V++IGD L+I+SN +Y S+ HR + N   + RIS AVF  P +   +  P PE +S ++PA F   T  ++I
Sbjct:  175 EYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKE-KVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHI 342          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 66/184 (35.87%), Postives = 108/184 (58.70%), Query Frame = -2
Query:  165 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 704
            ++ ++ E  R+   ++   +++L E L  +LCE LGL+   LK   +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+   E+W+DV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+S+A F++P   D++  P P LI   K   + +F   DY+
Sbjct:  102 QVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTD-GTRMSLASFYNPG-NDAVIYPAPSLIEESKQV-YPKFVFDDYM 282          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 60/153 (39.22%), Postives = 90/153 (58.82%), Query Frame = -2
Query:  237 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLY 689
            P+   K   E++  +  L   L  VL E +GL+ + L        + +V +YYP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G  W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P+   ++Y
Sbjct:  149 PQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEATVY 300          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = -2
Query:  138 LFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLD 626
            L GVL E +GL+T+ L +      + +V ++YP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+P+ GA V+N+GD    MSN  + + +H+ + N     R+SIA F +P+  D+   P   +   E+P      T T+   R   + LD
Sbjct:  174 LMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGE-SSRLSIATFQNPAP-DARVWPL-AVREGEEPILEEPITFTEMYRRKMERDLD 335          
The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO_DIACA9.951e-2636.18Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO2_MALDO9.951e-2637.631-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
FNSI_PETCR1.300e-2537.37Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
ACCO_PRUMU1.697e-2537.111-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO1_MALDO2.895e-2537.631-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
FL3H_ARATH3.781e-2539.87Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
LDOX_MALDO6.450e-2539.64Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
ACCO4_SOLLC8.424e-2535.871-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
FL3H_MATIN1.100e-2439.22Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_HORVU1.100e-2438.79Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_F11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_F11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTACACTTGAATTGTTATTCTT
ACGTAAGAATAGTTTATACAGGCACAAACAACCAGATTTACCAAGTTTTG
TTTCTTACAGCCTATAGTAATTCACCAATGTTTTTCCATCTAACTGCTTT
GTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAACTGCCGAAAACGAGC
TGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCCATAAAGGCTGTCCC
TCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTCGTGGTTCCGGGGAC
GAATTAGCCAATACTCTATGCTCTACACTTATGTATTCATCATTGGACAT
AATCTGAAGTATATCCCCAATGTTAATAACCAGAGCTCCTGGAACTGGTT
TAACATCCACCCATTCCTCACCATGCTTAATTTGCAGCCCACCTTTATCA
TCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTATGAGATGTGATCCC
CACTGTCAGATCAGGCTGCGGACAGTAGGGATAATAATGGCCCACCATCA
TCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTATCGGTTTTCAACCCC
AAACCTTCACACAGCACCCCAAACAAAAGCTCTCCGAGCTGTTTTACATG
GTGGTTCCACTCGACTGCCTCTTTCCTACATATTTCAGGAACTTCTTTCA
GCTCTGGCTCCGTCAGACCTAGCCTTATCTGC
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