CB304568

Overview
NameCB304568
Unique NameCB304568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:578..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 69/204 (33.82%), Postives = 115/204 (56.37%), Query Frame = -2
Query:  132 LTEPELKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHY---YPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR--FRQFTHTDYITRFFTKQLDGK 716
            L +  + EVP++    R+   ++   +++L E L  +LCE LGL+   LK+  +       G     YP CP+ DL  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+SIA F++P   D++  P P L+  E   +  + +F   DY+  +   +   K
Sbjct:   95 LPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTD-GTRMSIASFYNPG-NDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKLYAALKFQAK 296          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.100e-24
Identity = 72/205 (35.12%), Postives = 114/205 (55.61%), Query Frame = -2
Query:  132 LTEPELKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFL--EGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKP-ARFRQFTHTDYITRFFTKQLDGK 716
            L E  + ++P++    R+    +   ++ L E L  +LCE LGL+   L  K F    G    G     YP CP+PDL  G+ +HTD G + +L QDD+ GGLQ+    EWVDV P+  ++V+N+GD L++++N  Y SV HRV+A +    R+SIA F++P   D++  P P L+  E+    + +F   DY+  +   + + K
Sbjct:  100 LPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLT-KAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVIHRVVAQTDGN-RMSIASFYNPGS-DAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAK 301          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 68/189 (35.98%), Postives = 110/189 (58.20%), Query Frame = -2
Query:  165 LKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR---FRQFTHTDYI 701
            + E+P++    RK   E+   +++L E L  +LCE +GL+   LK+  +       G     YP CP+P+L  G+ +HTD G + +L QD+K  GLQ+    EW+DV P+  ++VINIGD L++++N +Y SV HRV+A      R+SIA F++P   D++  P P L+  E+  +   + +F   DY+
Sbjct:  100 ISEIPDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGN-RMSIASFYNPGS-DAVMYPAPALVDKEEDQQKQVYPKFVFEDYM 286          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 67/199 (33.67%), Postives = 109/199 (54.77%), Query Frame = -2
Query:  132 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQ----FTHTDYITRFFTKQLDGK 704
            +L ++ ++ R+   ++   +++L E L  +LCE LGL+   LK   +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+     W+DV P+  ++V+N+GD L++++N +Y SV HRV+A      R+S+A F++P   D+L  P P L+  E     +Q    F   DY+  +   +   K
Sbjct:  102 QLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GTRMSLASFYNPG-NDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAK 298          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.437e-24
Identity = 72/205 (35.12%), Postives = 113/205 (55.12%), Query Frame = -2
Query:  132 LTEPELKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFL--EGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKP-ARFRQFTHTDYITRFFTKQLDGK 716
            L E  + ++P++    R+    +   ++ L E L  +LCE LGL+   L  K F    G    G     YP CP+PDL  G+ +HTD G + +L QDD  GGLQ+    EWVDV P+  ++V+N+GD L++++N  Y SV HRV+A +    R+SIA F++P   D++  P P L+  E+    + +F   DY+  +   + + K
Sbjct:  100 LPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLT-KAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGN-RMSIASFYNPGS-DAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAK 301          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 67/198 (33.84%), Postives = 114/198 (57.58%), Query Frame = -2
Query:  132 LKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR-FRQFTHTDYITRFFTKQLDGK 701
            + E+P++    RK   E+   +++L E L  +LCE LGL+   LK+  +       G     YP CP+P+L  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+SIA F++P + D++  P   L+   + +  + +F   DY+  +   +   K
Sbjct:  100 ISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTD-GARMSIASFYNPGD-DAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAK 295          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 68/200 (34.00%), Postives = 115/200 (57.50%), Query Frame = -2
Query:  132 LKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYITRFFTKQLDGK 701
            + EVP++    R+   ++   +++L E L  +LCE LGL+   LK+  +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+   ++W+DV P+  ++VIN+GD L++++N +Y SV HRV+A +    R+S+A F++P+  D++  P P L+   + E    + +F   DY+  +   +   K
Sbjct:  100 ISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTD-GTRMSLASFYNPAS-DAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAK 297          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.451e-24
Identity = 63/179 (35.20%), Postives = 102/179 (56.98%), Query Frame = -2
Query:  135 EWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDG 662
            E+   ++ L   +  VL  GLGL+  RL+++      ++V    ++YP CPQP+L +G  +HTD   LT +L +   GLQ+ + ++WV  K VP +++++IGD L+I+SN +Y S+ HR L N   + RIS AVF  P +   +  P PE +S  +P RF   T   ++     ++ DG
Sbjct:  177 EYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKE-KVRISWAVFCEPPKEKIVLQPLPETVSEVEPPRFPPRTFAQHLKHKLFRKTDG 354          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 60/153 (39.22%), Postives = 89/153 (58.17%), Query Frame = -2
Query:  237 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLY 689
            PE  R    E++  +  L   L  VL E + L  D L        + +V ++YP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P+   ++Y
Sbjct:  151 PEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-HSRLSIATFQNPAPEATVY 302          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.201e-24
Identity = 69/197 (35.03%), Postives = 110/197 (55.84%), Query Frame = -2
Query:  132 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI--SPEKPARFRQFTHTDYITRFFTKQLDGK 704
            E+ ++ E  +K   E+   +++L E +  +LCE LGL+   LK+  +       G     YP CP+P+L  G+ +HTD G L +L QDDK  GL +    +WVDV P+  ++VIN+GD L++++N +Y SV HRV+A      R+SIA F++P   D++  P P L+    EK   + +F   DY+  +   +   K
Sbjct:  103 EIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGN-RMSIASFYNPG-NDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAK 297          
The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO_DIOKA1.100e-2433.821-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_ORYSJ1.100e-2435.121-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_ACTDE1.437e-2435.981-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO2_SOLLC1.437e-2433.671-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_ORYSI1.437e-2435.121-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_PEA1.877e-2433.841-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO4_PETHY1.877e-2434.001-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
LDOX_PERFR2.451e-2435.20Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
FL3H_VITVI3.201e-2439.22Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
ACCO3_CUCME3.201e-2435.031-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_F11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_F11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTACACTTGAATTGTTATTCTT
ACGTAAGAATAGTTTATACAGGCACAAACAACCAGATTTACCAAGTTTTG
TTTCTTACAGCCTATAGTAATTCACCAATGTTTTTCCATCTAACTGCTTT
GTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAACTGCCGAAAACGAGC
TGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCCATAAAGGCTGTCCC
TCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTCGTGGTTCCGGGGAC
GAATTAGCCAATACTCTATGCTCTACACTTATGTATTCATCATTGGACAT
AATCTGAAGTATATCCCCAATGTTAATAACCAGAGCTCCTGGAACTGGTT
TAACATCCACCCATTCCTCACCATGCTTAATTTGCAGCCCACCTTTATCA
TCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTATGAGATGTGATCCC
CACTGTCAGATCAGGCTGCGGACAGTAGGGATAATAATGGCCCACCATCA
TCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTATCGGTTTTCAACCCC
AAACCTTCACACAGCACCCCAAACAAAAGCTCTCCGAGCTGTTTTACATG
GTGGTTCCACTCGACTGCCTCTTTCCTACATATTTCAGGAACTTCTTTCA
GCTCTGGCTCCGTCAGACCTAGCCTTATCTGC
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