CB304568

Overview
NameCB304568
Unique NameCB304568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:578..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24
Identity = 61/177 (34.46%), Postives = 101/177 (57.06%), Query Frame = -2
Query:  165 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEG--RMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 689
            P   R+   E+   ++++ + +F  L  GLGL+   + E    +    ++  +YYP CP+PDL +G+ +HTD   +TIL+ ++  GLQ+     W DVK +P AL+++IGD ++I+SN +Y SV HR   N   + R+S  VF  P     + GP P+L+S   P +F+   + DY+
Sbjct:  165 PPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKD-KTRMSWPVFLEPPSEHEV-GPIPKLLSEANPPKFKTKKYKDYV 339          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.181e-24
Identity = 63/181 (34.81%), Postives = 101/181 (55.80%), Query Frame = -2
Query:  165 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 707
            P+ +EV E       E+  HVK L E +   L EGLGL  + +KE       M + HY PY P  D   G+  HTD   LT+++ ++  GLQ+   + W++V+ +P A+++NIGD + ++SN +Y +V H+   +   + R+S  V  SP+  D + GP PEL S + P +F+   + DY+
Sbjct:  110 PDYREVNE-------EYARHVKTLSEKIMEWLSEGLGLGREAIKEVNGCWYVMNINHYPPY-PHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKE-KTRMSWPVLVSPT-YDMVVGPLPELTSEDDPPKFKPIAYKDYV 280          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.131e-24
Identity = 70/194 (36.08%), Postives = 111/194 (57.22%), Query Frame = -2
Query:  156 LKEVPEIC---RKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLK-----EKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI---SPEKPARFRQFTHTDYITRF 701
            L E+P++    RK   E+   +++L E +  +LCE LGL+   LK       T L         YP CP+P+L  G+ +HTD G L +L QDD+  GLQ+    EWVDV P+  ++VIN+GD +++++N +Y SV HRV+A +    R+S+A F++P   D++  P P L+   + EK   + +F   DY+  +
Sbjct:   99 LSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGN-RMSLASFYNPGS-DAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLY 290          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 55/132 (41.67%), Postives = 76/132 (57.58%), Query Frame = -2
Query:  144 HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQ 539
            +YYP CPQP+L VG+ +HTD   L+ +L +   GLQ+ HG  WV  +  PG +++++GD L+I+SN  Y SV HR L N     RIS  VF  P     L  P PEL++   PARF   T   ++ R   K+
Sbjct:  237 NYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNRE-AVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKK 367          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 62/177 (35.03%), Postives = 102/177 (57.63%), Query Frame = -2
Query:  138 EWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI--KHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLD 662
            +++  + +L   L  VL E +GL+ + L +      + +V ++YP CP+PDLT+G+  HTDPG +T+LLQD  GGLQ    +G+ W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P+    +Y P  ++   EK       T  +   R  +K L+
Sbjct:  162 KYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAPEAIVY-PL-KIREGEKSIMDEPITFAEMYRRKMSKDLE 335          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 65/190 (34.21%), Postives = 105/190 (55.26%), Query Frame = -2
Query:  126 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTL 689
            PE  R     ++  +  L   L  VL E +GL+ + L +      + ++ +YYP CPQP+LT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD    +SN  + + +H+ + NS+   R+SIA F +P+   ++Y P  ++   EK       T  +   R  ++ ++  TL
Sbjct:  151 PEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN-SSRMSIATFQNPAPNATVY-PL-KIREGEKAVMEEPITFAEMYKRKMSRDIEMATL 337          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 67/190 (35.26%), Postives = 109/190 (57.37%), Query Frame = -2
Query:  165 LKEVPEI---CRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQ----FTHTDYI 701
            + EVP++    R+   ++   +++L E L  +LCE LGL+   LK+  +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+A +    R+S+A F++P   D++  P P L+  E     +Q    F   DY+
Sbjct:  100 ISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTD-GTRMSLASFYNPGS-DAVIYPAPTLVEKEADQECKQVYPKFVFDDYM 287          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23
Identity = 65/187 (34.76%), Postives = 106/187 (56.68%), Query Frame = -2
Query:  165 ELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPAR---FRQFTHTDYI 704
            E+ ++ E  R+   ++   +++L E L  +LCE LGL+   LK   +       G     YP CP+PDL  G+ +HTD G + +L QDDK  GLQ+    +W+DV P+  ++V+N+GD L++++N +Y SV HRV+A      R+S+A F++P   D++  P P L+  E       + +F   DY+
Sbjct:  102 EVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKD-GARMSLASFYNPGS-DAVIYPAPALVEKEAEENKQVYPKFVFDDYM 286          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.710e-23
Identity = 68/214 (31.78%), Postives = 113/214 (52.80%), Query Frame = -2
Query:   30 EWNHHVKQLGELLFGVLCEGLGLKTDRL-KEKTFLEGRM--MVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL*ETKLGKSGCLCLYKLFLRKNNNSSV 662
            E+   ++ L   +  VL  GLGL+  RL KE   +E  +  M  +YYP CPQP+L +G+ +HTD   LT +L +   GLQ+ +  +WV  K VP +++++IGD ++I+SN +Y S+ HR + N   + R S A+F  P +   +  P PE ++  +P RF   T   ++     ++ D    V +    E +L  +         L+K+N  +V
Sbjct:  175 EYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKE-KVRFSWAIFCEPPKEKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRKDDKDAAVEHKVFNEDELDTAA----EHKVLKKDNQDAV 383          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.622e-23
Identity = 63/176 (35.80%), Postives = 100/176 (56.82%), Query Frame = -2
Query:  168 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDY 689
            P   R+   E+   ++ + + LF  L  GL L+ +  K+    +    +M  +YYP CP+PDL +G+ +HTD   +T+L+ ++  GLQ+     W D K +P AL+++IGD ++IMSN +Y SV HR   N   + R+S  VF  P   D   GP P+L++ E PA+F+   + DY
Sbjct:  152 PPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFKDGAGGDDLVYLMKINYYPPCPRPDLALGV-AHTDMSAITVLVPNEVPGLQVYKDGHWYDCKYIPNALIVHIGDQVEIMSNGKYKSVYHRTTVNKE-KTRMSWPVFLEPPP-DHEVGPIPKLVNEENPAKFKTKKYKDY 324          
The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FLS_PETHY4.181e-2434.46Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_MATIN4.181e-2434.81Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
ACCO_PERAE7.131e-2436.081-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
LDOX_MAIZE9.314e-2441.67Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FL3H_PETHY9.314e-2435.03Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_PETCR9.314e-2434.21Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCO3_PETHY9.314e-2435.261-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY1.589e-2334.761-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
LDOX_PETHY2.710e-2331.78Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
FLS_EUSGR4.622e-2335.80Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_F11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_F11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTACACTTGAATTGTTATTCTT
ACGTAAGAATAGTTTATACAGGCACAAACAACCAGATTTACCAAGTTTTG
TTTCTTACAGCCTATAGTAATTCACCAATGTTTTTCCATCTAACTGCTTT
GTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAACTGCCGAAAACGAGC
TGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCCATAAAGGCTGTCCC
TCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTCGTGGTTCCGGGGAC
GAATTAGCCAATACTCTATGCTCTACACTTATGTATTCATCATTGGACAT
AATCTGAAGTATATCCCCAATGTTAATAACCAGAGCTCCTGGAACTGGTT
TAACATCCACCCATTCCTCACCATGCTTAATTTGCAGCCCACCTTTATCA
TCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTATGAGATGTGATCCC
CACTGTCAGATCAGGCTGCGGACAGTAGGGATAATAATGGCCCACCATCA
TCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTATCGGTTTTCAACCCC
AAACCTTCACACAGCACCCCAAACAAAAGCTCTCCGAGCTGTTTTACATG
GTGGTTCCACTCGACTGCCTCTTTCCTACATATTTCAGGAACTTCTTTCA
GCTCTGGCTCCGTCAGACCTAGCCTTATCTGC
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