CB304568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18 Identity = 59/148 (39.86%), Postives = 76/148 (51.35%), Query Frame = -2 Query: 180 VLCEGLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFT 617 VL E LG+ R + F EG +M +YYP C +P T+G H DP LTIL QD+ GGLQ+ W ++P A V+NIGD +SN Y S HR + NS PR S+A F P E D + P L+ P + FT Sbjct: 181 VLGESLGV--GRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSR-VPRKSLAFFLCP-EMDKVVAPPGTLVDAANPRAYPDFT 324
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18 Identity = 58/174 (33.33%), Postives = 92/174 (52.87%), Query Frame = -2 Query: 165 EWNHHVKQLGELLFGVLCEGLGLKTDRL----KEKTFLEGRMMVGH--YYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662 E++ ++ L + L + LGL +++ E+ E H +YP CP P +G+ +HTD G T +LQ GLQ+ +HG + WV V VPGA+V+N+GD+ QI++N + SV HR + N + RIS+ F P + P E ++ PA +R T +Y+ Sbjct: 165 EFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18 Identity = 58/174 (33.33%), Postives = 92/174 (52.87%), Query Frame = -2 Query: 165 EWNHHVKQLGELLFGVLCEGLGLKTDRL----KEKTFLEGRMMVGH--YYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662 E++ ++ L + L + LGL +++ E+ E H +YP CP P +G+ +HTD G T +LQ GLQ+ +HG + WV V VPGA+V+N+GD+ QI++N + SV HR + N + RIS+ F P + P E ++ PA +R T +Y+ Sbjct: 165 EFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18 Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = -2 Query: 165 EWNHHVKQLGELLFGVLCEGLGLKTDRL----KEKTFLEGRMMVGH--YYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQI-KHG-EEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 662 E++ ++ L + L + LGL +++ E E H +YP CP P +G+ +HTD G T +LQ GLQ+ +HG + WV V VPGA+V+N+GD+ QI++N + SV HR + N + RIS+ F P + P E ++ PA +R T +Y+ Sbjct: 165 EFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSD-RISLGYFLGPPAHVKV-APLREALA-GTPAAYRAVTWPEYM 335
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16 Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = -2 Query: 165 GLGLKTDRLKEKTFLEGRMMVG--HYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPA--RFRQFTHTDYI 605 G+ L +R K F E + +YYP C QP+L +G H DP LTIL QD GGLQ+ +W + P P A V+NIGD ++N Y S HR + NS E R + A F P + + + P EL++ K ++ FT + ++ Sbjct: 205 GMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERE-RKTFAFFLCP-KGEKVVKPPEELVNGVKSGERKYPDFTWSMFL 353
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16 Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = -2 Query: 165 GLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYI 605 GL L +R + F E +M ++YP C PDLT+G H DP LTIL QD GLQ+ +W ++P P A V+NIGD +SN + S HR + N R S+A F P ++D + P +++ K ++ FT + ++ Sbjct: 204 GLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRE-SARKSMAFFLCP-KKDKVVKPPSDILEKMKTRKYPDFTWSMFL 350
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.457e-16 Identity = 54/181 (29.83%), Postives = 95/181 (52.49%), Query Frame = -2 Query: 108 LFGVLCEGLGLKTDRLKEKTFLEGR---MMVGHYYPYCPQPDLT----VGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 626 + ++ EGL ++ + K ++ + + ++YP CP+ + +G HTDP ++IL ++ G QI + W+ V P + IN+GD LQ+M+N + SV HRVLAN +PR+S+ F P + + P P L+ K + +++FT +Y + + +L L NY R+ Sbjct: 147 ILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGI-DPRLSMIYFCGPPLSEKI-APLPSLMK-GKESLYKEFTWFEYKSSTYGSRLADNRLGNYERI 324
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 58/205 (28.29%), Postives = 102/205 (49.76%), Query Frame = -2 Query: 111 KEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKT----DRLKEKTFLEGRMMVGHYYPYCPQPDLT----VGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYR 698 +E P R + VK + + ++ EGLG++ RL + + + HY P CP+ VG HTDP +++L + GLQI + WV V P + IN+GD LQ+M+N + SV+HRVLA+++ + R+S+ F P+ +++ P P ++ + +++FT +Y +T +L L + + Sbjct: 127 RENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPP-CPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTT-KSRLSMIYFGGPALSENI-APLPSVMLKGEECLYKEFTWCEYKKAAYTSRLADNRLAPFQK 328
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 58/210 (27.62%), Postives = 97/210 (46.19%), Query Frame = -2 Query: 111 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGR---MMVGHYYPYCPQPDL-------TVGITSHTDPGPLTILLQDDKGGLQIKHGE-EWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYR 707 P L + P R E+ V+++ + + +GLG+K K + ++ ++YP CP + +G HTDP +++L ++ GLQI + W+ V P + N+GD LQ+M+N + SV HRVLAN + R+S+ F PS + P LI E + +FT ++Y + +L L + R Sbjct: 114 PSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCK-KSRVSMIYFAGPSLTQRI-APLTCLIDNEDERLYEEFTWSEYKNSTYNSRLSDNRLQQFER 321
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = -2 Query: 108 VGITSHTDPGPLTILLQDDKGGLQIK-HGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 503 +G H+DP LTIL ++ GGLQI H W+ V P P + +GD LQ+++N ++SV HRVL N++ +PR+S+ F +P + L P ++++ P +R FT Y + +L G T ++ +++ Sbjct: 204 IGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTT-KPRMSMMYFAAP-PLNWLISPLSKMVTAHSPCLYRPFTWAQYKQAAYALRL-GDTRLDQFKV 333 The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bpback to top |