CB304579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: RC22_ARATH (UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana GN=At2g24040 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 32/52 (61.54%), Postives = 42/52 (80.77%), Query Frame = -2 Query: 334 STATCVDIFLAVILPPLGVFLKFGC-KAEFWICLLLTILGYIPGIIYAVYAI 486 S C +IF+A++LPP+GV L+ GC EF+ICL+LT LGY+PGIIYA+YAI Sbjct: 4 SCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: PMP3_CRYNE (Plasma membrane proteolipid 3 OS=Cryptococcus neoformans GN=PMP3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.149e-11 Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = -2 Query: 328 TCVDIF---LAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITK 477 TC DIF LA+ILPPLGVFL+ GC A+ I +LLTILGYIPGII+A+Y I K Sbjct: 4 TCSDIFKIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIILK 56
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: RC21_ARATH (UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.500e-11 Identity = 25/48 (52.08%), Postives = 39/48 (81.25%), Query Frame = -2 Query: 328 VDIFLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITK 471 +++ A+ +PP+GVFL++G EFW+CLLLT+ +IPG+IYA+Y +TK Sbjct: 5 LEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: PMP3_GIBZE (Plasma membrane proteolipid 3 OS=Gibberella zeae GN=PMP3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.343e-11 Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = -2 Query: 328 IFLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITK 465 I LA+ILPP+GVFL+ GC A+F+I +LLTILGYIPGII+A+Y I K Sbjct: 21 IILAIILPPVGVFLERGCGADFFINILLTILGYIPGIIHALYIILK 66
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: RC23_ARATH (UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.447e-11 Identity = 35/56 (62.50%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 334 MADGSTATCVDIFLAVILPPLGVFLKFGC-KAEFWICLLLTILGYIPGIIYAVYAI 498 MA C +I +A++LPPLGV LK GC EF ICL+LTILGYIPGIIYA+Y I Sbjct: 1 MASNMEVFC-EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVI 55
BLAST of CB304579 vs. ExPASy Swiss-Prot
Match: YCU3_CAEEL (UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans GN=T23F2.3 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = -2 Query: 334 TCVDI---FLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 477 TC DI AV+LPP+GVFL+ GC IC+LLTILGYIPGIIYA Y I Sbjct: 4 TCTDIPKFICAVLLPPIGVFLEKGCDYHLAICILLTILGYIPGIIYACYVI 54 The following BLAST results are available for this feature:
BLAST of CB304579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304579 ID=CB304579; Name=CB304579; organism=Citrus sinensis; type=EST; length=571bpback to top |