CB304581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BRUC2 (50S ribosomal protein L25 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 33/115 (28.70%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 339 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLFRSKDEPVCKIA 680 +K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A + +D + IA Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIA 185
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BRUAB (50S ribosomal protein L25 OS=Brucella abortus GN=rplY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 33/115 (28.70%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 339 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLFRSKDEPVCKIA 680 +K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A + +D + IA Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIA 185
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BRUA2 (50S ribosomal protein L25 OS=Brucella abortus (strain 2308) GN=rplY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 33/115 (28.70%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 339 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLFRSKDEPVCKIA 680 +K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A + +D + IA Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIA 185
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BRUA1 (50S ribosomal protein L25 OS=Brucella abortus (strain S19) GN=rplY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 33/115 (28.70%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 339 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV-HPALKLFRSKDEPVCKIA 680 +K++VLP+ L D P +V FLR ++++ ++VP+ F+ ++ PG+++GG LN ++ V+ + PA+ +P +++DLS L++ + +K+ A + +D + IA Sbjct: 71 KKIQVLPKDYQLDPVRDFPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSVHISAVKLPKGATPAIQDRDFTIATIA 185
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BART1 (50S ribosomal protein L25 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplY PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.494e-12 Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 414 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 680 +K+ VLP+ L D PL+V FLR ++++++++P+ F +D PGL+KGG LN ++ ++ PA+ +P I++DLS + I Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSI 159
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BARHE (50S ribosomal protein L25 OS=Bartonella henselae GN=rplY PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12 Identity = 31/89 (34.83%), Postives = 55/89 (61.80%), Query Frame = -1 Query: 414 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 680 +K+ VLP+ L D PL+V FLR ++++++++P+ F +D PGL+KGG LN ++ ++ PA+ +P I++DLS + I Sbjct: 71 QKIMVLPKDYQLDPVRDFPLHVDFLRISAKSIVEVNIPVHFLNEDSAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSI 159
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BRAJA (50S ribosomal protein L25 OS=Bradyrhizobium japonicum GN=rplY PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 33/113 (29.20%), Postives = 61/113 (53.98%), Query Frame = -1 Query: 342 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLFRSKDEPVCKI 680 +K RV+PR HL D P++V F+R A ++I VPL + +PG+++GG +N + ++ C + +P YI+ D+ L++ + D+K+ +K +D + I Sbjct: 72 KKHRVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTVNIVAHAIELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTREDATLVTI 184
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_PARL1 (50S ribosomal protein L25 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplY PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 32/93 (34.41%), Postives = 54/93 (58.06%), Query Frame = -1 Query: 393 RVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKV 671 RV+PR V D ++V FLR A + +DVP+ F + +PG++ GG LN ++ V+ +CPAD +P +D+DL+ ++ I +K+ Sbjct: 74 RVIPRDVQFEPVRDFIIHVDFLRLGKNATVTVDVPVHFHNHEASPGIKAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHISAVKL 166
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_BARBK (50S ribosomal protein L25 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplY PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 29/89 (32.58%), Postives = 54/89 (60.67%), Query Frame = -1 Query: 414 EKVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKI 680 EK++VLP+ L D P++V FLR ++++ +++P+ F +D PG+++GG LN ++ ++ PA+ +P I +DLS + I Sbjct: 71 EKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSIVHVNIPVHFLNEDTAPGIKRGGVLNIVRHEIECTAPANAIPDAIQIDLSSYSIGDSI 159
BLAST of CB304581 vs. ExPASy Swiss-Prot
Match: RL25_AZOC5 (50S ribosomal protein L25 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplY PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = -1 Query: 342 KVRVLPRKVHLPSGTDAPLNVTFLRAPPEALLKIDVPLVFRGDDVTPGLRKGGYLNTIKRTVKFLCPADIVPPYIDVDLSELDVEQKILAGDLKVHPALKLFRSKDEPVCKI 677 K RV+PR L D PL+V FLR A + ++VP+ F D PGL+ GG LN + V CPA+ +P ++ DL+ L++ + +K+ + + D+ + I Sbjct: 72 KHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVTVEVPVHFENQDKAPGLKSGGTLNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKVKLPAGVSSAVTGDDTLATI 183 The following BLAST results are available for this feature:
BLAST of CB304581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304581 ID=CB304581; Name=CB304581; organism=Citrus sinensis; type=EST; length=683bpback to top |