CB304600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_RAT (60S ribosomal protein L3 OS=Rattus norvegicus GN=Rpl3 PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 305 TDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_MOUSE (60S ribosomal protein L3 OS=Mus musculus GN=Rpl3 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 305 TDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_BOVIN (60S ribosomal protein L3 OS=Bos taurus GN=RPL3 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 5.138e-27 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_MACFA (60S ribosomal protein L3 OS=Macaca fascicularis GN=RPL3 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 6.710e-27 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_HUMAN (60S ribosomal protein L3 OS=Homo sapiens GN=RPL3 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 6.710e-27 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE I LKFIDT+SKFGHGRFQT +EK + G LK Sbjct: 305 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 3.330e-26 Identity = 57/89 (64.04%), Postives = 68/89 (76.40%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 TEFDRT+K ITPMGGF HYG VN D++++KG G +KRVVTLR+SL TSR ALE + LK+IDT+SKFG GRFQT EK + G LK Sbjct: 297 TEFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNLKWIDTASKFGKGRFQTPAEKHAFMGTLK 385
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_KLULA (60S ribosomal protein L3 OS=Kluyveromyces lactis GN=RPL3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.419e-26 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 TEFDRT+K ITPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR ALE + LK+IDT+SKFG GRFQT EK + G LK Sbjct: 296 TEFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTLKWIDTASKFGKGRFQTPAEKHAFLGTLK 384
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 115.546 bits (288), Expect = 1.266e-25 Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALE + LK+IDT+SKFG GRFQT EK + G LK Sbjct: 296 TSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMGTLK 384
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3_ENCCU (60S ribosomal protein L3 OS=Encephalitozoon cuniculi GN=RPL3-1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.653e-25 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 222 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 491 TEFD TEK I+PMGGFPHYG V D++++KG VG +KRVVTLR+SLL+Q A E + +KF+DTSSK GHGRFQT+ EK +YG KA Sbjct: 290 TEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEELVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
BLAST of CB304600 vs. ExPASy Swiss-Prot
Match: RL3B_SCHPO (60S ribosomal protein L3-B OS=Schizosaccharomyces pombe GN=rpl3b PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 3.682e-25 Identity = 55/89 (61.80%), Postives = 67/89 (75.28%), Query Frame = -2 Query: 225 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEGIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 491 T+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + LK+IDT+SKFGHGRFQT E ++ G LK Sbjct: 296 TDFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSLKWIDTASKFGHGRFQTPAEAKQFLGTLK 384 The following BLAST results are available for this feature:
BLAST of CB304600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304600 ID=CB304600; Name=CB304600; organism=Citrus sinensis; type=EST; length=492bpback to top |