CB304605 | Citrus Genome Database

Overview


Name	CB304605
Unique Name	CB304605
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	362

Libraries


Library Name	Type
Flavedo Mature	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:123..483.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOG_RAT (Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.116e-21
Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG EA +AG  FR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGEEARFAGHNFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOG_MOUSE (Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.988e-21
Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG EA +AG  FR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOG_HUMAN (Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 7.988e-21
Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG EA +AG  FR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOA_ALLMI (Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 7.988e-21
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG++A +AG  FR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSKARFAGRNFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_SCHJA (Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.043e-20
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETED FIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG+ A YAG  FR P
Sbjct:  375 GETEDNFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSTAKYAGKHFRHP 432

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_HOMGA (Enolase OS=Homarus gammarus PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.363e-20
Identity = 48/58 (82.76%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETED FIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG+ A +AG  FRAP
Sbjct:  375 GETEDCFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSGAKFAGKNFRAP 432

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOB_CHICK (Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.779e-20
Identity = 48/58 (82.76%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG +A +AG KFR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAKFAGRKFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_FASHE (Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.324e-20
Identity = 48/58 (82.76%), Postives = 49/58 (84.48%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETED FIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEE+LG  A YAG  FR P
Sbjct:  374 GETEDNFIADLVVGLRTGQIKTGAPCRSERLAKYNQLLRIEEDLGGAAKYAGENFRRP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOA_SCEUN (Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.324e-20
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG++  +AG  FR P
Sbjct:  374 GETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSKGRFAGRNFRNP 431

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.964e-20
Identity = 48/58 (82.76%), Postives = 50/58 (86.21%), Query Frame = -1

Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GETEDTFIADL V L TGQIKTGAPCRSERLAKYNQL+RIEEELG EA +AG  FR P
Sbjct:  374 GETEDTFIADLVVALCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGHNFRNP 431

The following BLAST results are available for this feature:

BLAST of CB304605 vs. ExPASy Swiss-Prot

BLAST of CB304605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENOG_RAT	6.116e-21	84.48	Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV...	[more]
ENOG_MOUSE	7.988e-21	84.48	Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2	[more]
ENOG_HUMAN	7.988e-21	84.48	Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3	[more]
ENOA_ALLMI	7.988e-21	82.76	Alpha-enolase OS=Alligator mississippiensis PE=2 S...	[more]
ENO_SCHJA	1.043e-20	84.48	Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1	[more]
ENO_HOMGA	1.363e-20	82.76	Enolase OS=Homarus gammarus PE=1 SV=1	[more]
ENOB_CHICK	1.779e-20	82.76	Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3	[more]
ENO_FASHE	2.324e-20	82.76	Enolase OS=Fasciola hepatica GN=ENO PE=2 SV=1	[more]
ENOA_SCEUN	2.324e-20	81.03	Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3	[more]
ENOG_CHICK	3.964e-20	82.76	Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	FLAVEDO0001_IaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_C08 3, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB304605 ID=CB304605; Name=CB304605; organism=Citrus sinensis; type=EST; length=362bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAAACTGTGTCAAAATTA
TTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATCCAT
TTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACCACA
CCAAATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTT
GGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAAAA
GCTGATTATACTTTGCAAGACGCTCTGACCTGCATGGGGCTCCTGTCTTA
ATTTGACCCGTGGCCAAGCCCACTGAAAGATCGGCAATGAAAGTATCTTC
AGTCTCACCACC