CB304605

Overview
NameCB304605
Unique NameCB304605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_DEIRA (Enolase OS=Deinococcus radiodurans GN=eno PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.694e-13
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GE+ED FIADL+V    GQIKTG+  RS+R+AKYNQLLRIE++LG  AV+ G K
Sbjct:  366 GESEDAFIADLAVATNAGQIKTGSASRSDRIAKYNQLLRIEDQLGDRAVFPGRK 419          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_DEIDV (Enolase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=eno PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.694e-13
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GE+ED+FIADL+V    GQIKTG+  RS+R+AKYNQLLRIE  LG  AVY G K
Sbjct:  366 GESEDSFIADLAVATNAGQIKTGSASRSDRIAKYNQLLRIEHALGDRAVYLGRK 419          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO2_RALME (Enolase 2 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=eno2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.694e-13
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = -1
Query:  192 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 359
            GETED  IADL+V L  GQIKTG+  R++R AKYN+LLRIE ELG+ A YAGA  R
Sbjct:  368 GETEDVTIADLAVALRCGQIKTGSMSRADRTAKYNRLLRIERELGSRAEYAGALLR 423          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_VIBFM (Enolase OS=Vibrio fischeri (strain MJ11) GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG +A + G K
Sbjct:  374 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGLK 427          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_VIBF1 (Enolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG +A + G K
Sbjct:  374 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPFNGLK 427          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_RHILO (Enolase OS=Rhizobium loti GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETED+ IADL+V    GQIKTG+  RS+R+AKYNQL+RIEEELG +A YAG
Sbjct:  367 GETEDSTIADLAVATNCGQIKTGSLSRSDRMAKYNQLIRIEEELGKQARYAG 418          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_METRJ (Enolase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETED+ IADL+V    GQIKTG+  RS+RLAKYNQL+RIEE LG +A+YAG
Sbjct:  368 GETEDSTIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEGLGPQALYAG 419          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_METMP (Enolase OS=Methanococcus maripaludis GN=eno PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = -1
Query:  186 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 359
            GE+ED+ IADL+V L  GQIKTGAP R ER AKYNQL+RIEEEL   + YAG  F+ P
Sbjct:  369 GESEDSTIADLAVALNAGQIKTGAPARGERTAKYNQLMRIEEELQI-SKYAGKDFKIP 425          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_MARAV (Enolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETEDT IADL+V    GQIKTG+ CRS+R+AKYNQLLRIEE L  +A Y G
Sbjct:  372 GETEDTTIADLAVATCAGQIKTGSLCRSDRVAKYNQLLRIEEALEGKAPYRG 423          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_HYDS0 (Enolase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=eno PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.130e-13
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = -1
Query:  207 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYA 359
            GETEDTFIA L+VG   GQIKTG+  RSER+AKYN+LLRIEE LG  A+YA
Sbjct:  365 GETEDTFIAHLAVGTNAGQIKTGSLSRSERIAKYNELLRIEEYLGYGAMYA 415          
The following BLAST results are available for this feature:
BLAST of CB304605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_DEIRA4.694e-1364.81Enolase OS=Deinococcus radiodurans GN=eno PE=3 SV=... [more]
ENO_DEIDV4.694e-1366.67Enolase OS=Deinococcus deserti (strain VCD115 / DS... [more]
ENO2_RALME4.694e-1366.07Enolase 2 OS=Ralstonia metallidurans (strain CH34 ... [more]
ENO_VIBFM6.130e-1366.67Enolase OS=Vibrio fischeri (strain MJ11) GN=eno PE... [more]
ENO_VIBF16.130e-1366.67Enolase OS=Vibrio fischeri (strain ATCC 700601 / E... [more]
ENO_RHILO6.130e-1369.23Enolase OS=Rhizobium loti GN=eno PE=3 SV=1[more]
ENO_METRJ6.130e-1369.23Enolase OS=Methylobacterium radiotolerans (strain ... [more]
ENO_METMP6.130e-1365.52Enolase OS=Methanococcus maripaludis GN=eno PE=3 S... [more]
ENO_MARAV6.130e-1369.23Enolase OS=Marinobacter aquaeolei (strain ATCC 700... [more]
ENO_HYDS06.130e-1372.55Enolase OS=Hydrogenobaculum sp. (strain Y04AAS1) G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304605 ID=CB304605; Name=CB304605; organism=Citrus sinensis; type=EST; length=362bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAAACTGTGTCAAAATTA
TTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATCCAT
TTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACCACA
CCAAATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTT
GGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAAAA
GCTGATTATACTTTGCAAGACGCTCTGACCTGCATGGGGCTCCTGTCTTA
ATTTGACCCGTGGCCAAGCCCACTGAAAGATCGGCAATGAAAGTATCTTC
AGTCTCACCACC
back to top