CB304605

Overview
NameCB304605
Unique NameCB304605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length362
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_DECAR (Enolase OS=Dechloromonas aromatica (strain RCB) GN=eno PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETED+ IAD++VGL  GQIKTG+  RS+R+AKYNQL+RIEE+LG  A Y G
Sbjct:  368 GETEDSTIADIAVGLNAGQIKTGSLSRSDRIAKYNQLIRIEEDLGDTASYPG 419          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_ANASK (Enolase OS=Anaeromyxobacter sp. (strain K) GN=eno PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETEDT IADL+V    GQIKTG+  R++R+AKYNQLLRIEEELG    YAG
Sbjct:  370 GETEDTTIADLAVACDCGQIKTGSASRTDRIAKYNQLLRIEEELGGAGRYAG 421          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_AGRT5 (Enolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=eno PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.006e-13
Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = -1
Query:  204 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 359
            GETED+ IADL+V    GQIKTG+  RS+RLAKYNQL+RIEE LG +A YAG
Sbjct:  367 GETEDSTIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEMLGPQAAYAG 418          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPY (Enolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPS (Enolase OS=Yersinia pseudotuberculosis GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPP (Enolase OS=Yersinia pestis (strain Pestoides F) GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPN (Enolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPG (Enolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPE (Enolase OS=Yersinia pestis GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_YERPB (Enolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=eno PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.046e-12
Identity = 36/54 (66.67%), Postives = 42/54 (77.78%), Query Frame = -1
Query:  198 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 359
            GETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  373 GETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGDRAPFNGLK 426          
The following BLAST results are available for this feature:
BLAST of CB304605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_DECAR8.006e-1367.31Enolase OS=Dechloromonas aromatica (strain RCB) GN... [more]
ENO_ANASK8.006e-1369.23Enolase OS=Anaeromyxobacter sp. (strain K) GN=eno ... [more]
ENO_AGRT58.006e-1369.23Enolase OS=Agrobacterium tumefaciens (strain C58 /... [more]
ENO_YERPY1.046e-1266.67Enolase OS=Yersinia pseudotuberculosis serotype O:... [more]
ENO_YERPS1.046e-1266.67Enolase OS=Yersinia pseudotuberculosis GN=eno PE=3... [more]
ENO_YERPP1.046e-1266.67Enolase OS=Yersinia pestis (strain Pestoides F) GN... [more]
ENO_YERPN1.046e-1266.67Enolase OS=Yersinia pestis bv. Antiqua (strain Nep... [more]
ENO_YERPG1.046e-1266.67Enolase OS=Yersinia pestis bv. Antiqua (strain Ang... [more]
ENO_YERPE1.046e-1266.67Enolase OS=Yersinia pestis GN=eno PE=3 SV=1[more]
ENO_YERPB1.046e-1266.67Enolase OS=Yersinia pseudotuberculosis serotype IB... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304605 ID=CB304605; Name=CB304605; organism=Citrus sinensis; type=EST; length=362bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAAACTGTGTCAAAATTA
TTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATCCAT
TTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACCACA
CCAAATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTT
GGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAAAA
GCTGATTATACTTTGCAAGACGCTCTGACCTGCATGGGGCTCCTGTCTTA
ATTTGACCCGTGGCCAAGCCCACTGAAAGATCGGCAATGAAAGTATCTTC
AGTCTCACCACC
back to top