CB304613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.093e-25 Identity = 58/111 (52.25%), Postives = 73/111 (65.77%), Query Frame = -3 Query: 255 LVCALLLCILVTAPVAN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 581 LV + +L+ P AI+CGQV ++++PC+ + R GG P CCSGVRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DCS V Sbjct: 8 LVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYAR-GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.427e-25 Identity = 60/112 (53.57%), Postives = 72/112 (64.29%), Query Frame = -3 Query: 252 LVCALLLCILVTAPVAN-AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 L C ++LC+LV AP+A AI+ QV +SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K I I VAAGLP QC V IPYKISPS DC RV+ Sbjct: 9 LACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.434e-25 Identity = 56/109 (51.38%), Postives = 70/109 (64.22%), Query Frame = -3 Query: 252 VCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 578 VC LLL + A+AITCGQV + L C+ + R GG PP CC+GVR+LN A+TTPDRQ ACNCLK G+ + AG+P +CGV IPY I TDC++VR Sbjct: 7 VCFLLLLAFLIG-TASAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 252 LVCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 ++ AL+ +L+ A A AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 10 VLVALVAAMLLVAADA-AISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.152e-25 Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 252 LVCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 ++ A++ +L+ A A AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 10 VLVAMVAAMLIVATDA-AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.082e-25 Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 252 LVCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 ++ A++ +L+ A A AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 10 VLVAMVAAMLLVATDA-AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.208e-24 Identity = 60/115 (52.17%), Postives = 76/115 (66.09%), Query Frame = -3 Query: 252 LVC--ALLLCILVTAPVANA-ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPN--VAAGLPSQCGVRIPYKISPSTDCSRVR 581 LVC A++ C+ V P A A ++CGQV +L PCI ++ GG P CC+GVRSL A+TT DRQ+ CNCLK+A I N +AAGLP +CGV IPYKISPSTDC ++ Sbjct: 10 LVCLVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.578e-24 Identity = 51/91 (56.04%), Postives = 67/91 (73.63%), Query Frame = -3 Query: 255 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 527 +TCGQV +LA CI FL+ GG PP CC+GV+++ ++RTT DR+A C+CLK A G +RGI PN A LP +CGV IPYKIS ST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.515e-24 Identity = 54/112 (48.21%), Postives = 69/112 (61.61%), Query Frame = -3 Query: 252 LVCALLLCILVTAPVAN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 581 L C + C++V P+ + A++CG V+ +APCI +L P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 7 LACLIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of CB304613 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.590e-24 Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 255 LVCALLLCILVTAPVANAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 581 ++ A++ +L+ A A AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC CLK +I+GI +G+P +CGV +P+ IS STDC++V Sbjct: 10 VLVAMVAAMLLVATDA-AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117 The following BLAST results are available for this feature:
BLAST of CB304613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304613 ID=CB304613; Name=CB304613; organism=Citrus sinensis; type=EST; length=583bpback to top |