CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_RALEH (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=clpP PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID+++ Sbjct: 101 DTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVL 212
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CUPTR (ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=clpP PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID+++ Sbjct: 101 DTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVL 212
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP7 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=clpP PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.272e-22 Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = -1 Query: 274 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 627 DTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ IK Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVLTHRDIK 196
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_ACTPJ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=clpP PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22 Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP2 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=clpP PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.875e-22 Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+++ Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 50/111 (45.05%), Postives = 77/111 (69.37%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 D M +KS V T CVG A +A F+LAGG KG R A+P SRI + P G ++GQA + +E++E+LR+RD + + S +TGQ E+I++D++R + ++EA +YGL+D+I Sbjct: 82 DAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQPEGGSQGQASVVLSESEEVLRIRDEVAQIYSERTGQTLERISRDMNRDQFMSAREAKDYGLVDQI 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BACSU (ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis GN=clpP PE=1 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 53/112 (47.32%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EALEYGLID+I+ Sbjct: 79 DTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNSC (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9605) GN=clpP3 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.610e-22 Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR+++ + + LS +GQ FEKI KD R ++EA EYGLIDR+I P Sbjct: 82 DTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLSAEEAKEYGLIDRVISHP 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22 Identity = 47/111 (42.34%), Postives = 78/111 (70.27%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 DTM +K+ V T CVG A +A F+LAGG +G R A+P SRI + P G +RGQA ++ +E++E++R+R + K +++TGQP +I++DL R + ++EA +YG++D++ Sbjct: 82 DTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDRDQFLSAREAKDYGIVDQV 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG R A+P S I + P G ARGQA DI+ A++++++++ + + LS +TGQPFEKI +D R ++EA YG++D ++ Sbjct: 79 DTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIMIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEAKAYGIVDEVM 190 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |