CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 289 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 627 DTMQ +K + T +G A + FLLA G KG R A+P +RI L PA G GQA D+ A EL+R + + + LS TGQP++KI +D R G++EA+EYGLID I+R Sbjct: 85 DTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIVR 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C+G A + FLL+ G KG R A+P +RI + P G A+GQA DI +A E+LR++ + + L+ TGQ +KI KD R S+EA EYGLID+++ Sbjct: 80 DTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHARIMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEEAKEYGLIDQVL 191
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_HAEDU (ATP-dependent Clp protease proteolytic subunit OS=Haemophilus ducreyi GN=clpP PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C G A + FLL+GG+KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQ F K+ D R + EA YGLID+++ Sbjct: 79 DTMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEAKNYGLIDKVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP4_PROM9 (ATP-dependent Clp protease proteolytic subunit 4 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP4 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 51/113 (45.13%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 289 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 627 DTMQ + V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA+EYGLID++I+ Sbjct: 106 DTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEAVEYGLIDKVIK 218
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI +A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_GLUOX (ATP-dependent Clp protease proteolytic subunit 1 OS=Gluconobacter oxydans GN=clpP1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ PV T C+G A + LLAGGEKG+R A+P +R+ + P+G A+GQA DI +A E+L +R + + TGQ E+I + L R + EA E+GLID+++ Sbjct: 92 DTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHRYALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIEQKLERDSYLSANEAREFGLIDKVV 203
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_SHESM (ATP-dependent Clp protease proteolytic subunit OS=Shewanella sp. (strain MR-4) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A+EYGL+D ++ Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLELIERDTDRDNFMSATQAVEYGLVDAVM 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_SHESA (ATP-dependent Clp protease proteolytic subunit OS=Shewanella sp. (strain ANA-3) GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A+EYGL+D ++ Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_SHEON (ATP-dependent Clp protease proteolytic subunit OS=Shewanella oneidensis GN=clpP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19 Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLAGGEKG R +P SR+ + P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + +A+EYGL+D ++ Sbjct: 87 DTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATQAVEYGLVDAVM 198 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |