CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMP (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22 Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = -1 Query: 274 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 627 DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ E I D R QEA+EYGLID ++ +K Sbjct: 77 DTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNTELSERTGKELETIKGDTDRDFYMSPQEAVEYGLIDLVLDKKPVK 194
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_PROM9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.633e-22 Identity = 54/118 (45.76%), Postives = 74/118 (62.71%), Query Frame = -1 Query: 274 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 627 DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + ELS +TG+ +E I +D R EA+EYGLID ++ +K Sbjct: 77 DTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYETIKEDTDRDFYMSPSEAVEYGLIDLVLDKKPVK 194
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_VARPS (ATP-dependent Clp protease proteolytic subunit OS=Variovorax paradoxus (strain S110) GN=clpP PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21 Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+GFA + FLLA GEKG R ++P S+I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + EA +YGL+D++I Sbjct: 87 DTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYFLTADEAKDYGLVDQVI 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CHLCH (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium chlorochromatii (strain CaD3) GN=clpP PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.127e-21 Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKED 627 DTMQ ++ + T CVG A + FLLA G KG R+++P SRI + P+G A+GQ DI +A E+ ++R + + L++ TGQP EK+ +D R + QEALEYGLID I RP K+D Sbjct: 104 DTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQPSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEALEYGLIDAIFEKRPTPEKKD 225
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA GEKG R A+P S + + P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R + EALEYGLID+++ Sbjct: 79 DTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21 Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+LR++ + + ++ +TGQP EKI KD R ++EA EYGLID++I Sbjct: 82 DTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21 Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+LR++ + + ++ +TGQP EKI KD R ++EA EYGLID++I Sbjct: 82 DTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMSAEEAREYGLIDQVI 194
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_SYNS9 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain CC9902) GN=clpP1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.473e-21 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A + FLL G KG RS++ SRI + P G A GQA DIR +ADE+L ++D + ELS +TGQP ++I +D R EA+ YGLID +I Sbjct: 77 DTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVSYGLIDSVI 188
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THET8 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpP PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THET2 (ATP-dependent Clp protease proteolytic subunit OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpP PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++ Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |