CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNS9 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain CC9902) GN=clpP3 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21 Identity = 57/116 (49.14%), Postives = 73/116 (62.93%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA DI EA E+LR++D + L+ +GQ FEKI KD R ++EA+ YGLIDR+I P Sbjct: 82 DTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLSAEEAMAYGLIDRVISHP 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21 Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DTM+ +KS V T CVG A + FLL+ G K R A+P SRI + P G ++ QA DI EA E+LR++D + + ++ TGQPFEKI KD R ++EA +YGLID++I P Sbjct: 82 DTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLSAKEAKDYGLIDKVISHP 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMA (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus GN=clpP1 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DT+Q +K V T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L ++ + ELS +TGQP KI +D R EA+ YG+ID ++ Sbjct: 77 DTIQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQATDIRIQADEILFLKQKLNTELSNRTGQPLSKIAEDTDRDFYMSPSEAISYGIIDNVL 188
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_RALSO (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum GN=clpP PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21 Identity = 53/112 (47.32%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG R A+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP +KI +D R +A EYGLID+++ Sbjct: 101 DTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEYGLIDKVL 212
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_METPP (ATP-dependent Clp protease proteolytic subunit OS=Methylibium petroleiphilum (strain PM1) GN=clpP PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.512e-21 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG R A+P SR+ + P+G A+GQA DI +A E+L++R+ + L+ +TGQP EKI D R ++EA YGLID++I Sbjct: 87 DTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRVMIHQPSGGAQGQATDIEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEEATGYGLIDKVI 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THETN (ATP-dependent Clp protease proteolytic subunit OS=Thermoanaerobacter tengcongensis GN=clpP PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+ A+ LLR+RD + + LS TGQP EKI D+ R ++EA YG+ID I+ Sbjct: 79 DTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+ ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++ Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+ ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++ Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+ ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++ Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_DESDG (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio desulfuricans (strain G20) GN=clpP PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.280e-21 Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ + +PV T C+G A + FLLA G+ G R A+P SRI + P G A+GQA DI +A E+LR++D + + LSR TGQP EKI + R G + A +G+IDRI+ Sbjct: 78 DTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPNSRIMIHQPMGGAQGQATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGPENAKNFGIIDRIL 189 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |