CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BRUAB (ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus GN=clpP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 627 DTMQ ++ PV T C+G A + LL G G+R A+P +RI + P+G +GQA DI A ++++++ + + + TG+ ++ I + L R +QEALE+GLID+++ + D Sbjct: 87 DTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSAD 206
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BRUA2 (ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus (strain 2308) GN=clpP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 627 DTMQ ++ PV T C+G A + LL G G+R A+P +RI + P+G +GQA DI A ++++++ + + + TG+ ++ I + L R +QEALE+GLID+++ + D Sbjct: 87 DTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSAD 206
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BRUA1 (ATP-dependent Clp protease proteolytic subunit OS=Brucella abortus (strain S19) GN=clpP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 627 DTMQ ++ PV T C+G A + LL G G+R A+P +RI + P+G +GQA DI A ++++++ + + + TG+ ++ I + L R +QEALE+GLID+++ + D Sbjct: 87 DTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSAD 206
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BLOPB (ATP-dependent Clp protease proteolytic subunit OS=Blochmannia pennsylvanicus (strain BPEN) GN=clpP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 43/112 (38.39%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DT+Q ++ V T C+G A ++ FLLA G KG R +P +RI + P G+ +GQA DI E+L++++ I K +++ TGQ + I KD R + EA++YGL+D ++ Sbjct: 93 DTIQFVRPDVSTFCMGQAASMSAFLLASGTKGKRFCLPNARIMIHQPLGSFQGQATDIAIHTREILKIKNNINKLMAKHTGQSIDIINKDTERDCFLSADEAMKYGLVDCVL 204
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_TROW8 (ATP-dependent Clp protease proteolytic subunit 2 OS=Tropheryma whipplei (strain TW08/27) GN=clpP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ + T C+G A A +L+ G G R A+P +RI + P A + GQA DI +A E++R+R+++ K L++ + + ++++KD+ R K S++ALEYGLID+I+ Sbjct: 84 DTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQALEYGLIDQIL 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_TROWT (ATP-dependent Clp protease proteolytic subunit 1 OS=Tropheryma whipplei (strain Twist) GN=clpP1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ + T C+G A A +L+ G G R A+P +RI + P A + GQA DI +A E++R+R+++ K L++ + + ++++KD+ R K S++ALEYGLID+I+ Sbjct: 84 DTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQALEYGLIDQIL 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_BURXL (ATP-dependent Clp protease proteolytic subunit 1 OS=Burkholderia xenovorans (strain LB400) GN=clpP1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C GFA + FLL G++G R A+P +RI + P+G ++G A D+ +A E+L +R+ + ++ +TG+ E+I +D R + A YGL+D ++ Sbjct: 89 DTMQFIKPEVSTLCTGFAASMGTFLLTAGQRGKRYALPNARIMIHQPSGGSQGTAADVEIQAKEVLYLRERLNAMMAERTGRSIEEIARDTDRDNFMSAHAAKTYGLVDEVL 200
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_THIDA (ATP-dependent Clp protease proteolytic subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=clpP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLL G KG R +P SR+ + P G +GQA DI A E+L ++ + L++ TGQ E I +D R ++++++YGL+D+++ Sbjct: 93 DTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRDNFMSAEDSVKYGLVDKVL 204
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_SPHAL (ATP-dependent Clp protease proteolytic subunit OS=Sphingopyxis alaskensis GN=clpP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = -1 Query: 259 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKEDMPR 627 DTMQ ++ VGT C+G A + FLLA GE G R A+ +R+ + P+G ARG A DI +A E+LR+R + + TG+ + I K + R + EA E+G++D + RP +D PR Sbjct: 84 DTMQYIRPRVGTVCIGQAASMGSFLLAAGEPGMRVALTNARVMVHQPSGGARGMASDIEIQAKEILRIRKRMNDLYVKYTGKSLKDIEKAMDRDTFLEADEAKEFGIVDHVYDRRPALPGDDAPR 208
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_PSEE4 (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas entomophila (strain L48) GN=clpP PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 DTMQ +K V T C+G A + FLLA G G R +P SR+ + P G +GQA DI A E+L ++ + + L+ TGQ E I +D R + A EYGLID + Sbjct: 95 DTMQFIKPDVSTICIGQACSMGAFLLAAGAAGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAHHTGQSLETIKRDTERDNFMSAARAAEYGLIDSV 205 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |