CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_LISMF (ATP-dependent Clp protease proteolytic subunit OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K+ V T +G A + FLL G G R A+P + I + P G A+GQA +I A +L++++ + ++ KTGQP+E I +D R +QEA +YGLID II Sbjct: 79 DTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_LISIN (ATP-dependent Clp protease proteolytic subunit OS=Listeria innocua GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K+ V T +G A + FLL G G R A+P + I + P G A+GQA +I A +L++++ + ++ KTGQP+E I +D R +QEA +YGLID II Sbjct: 79 DTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDII 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_LARHH (ATP-dependent Clp protease proteolytic subunit OS=Laribacter hongkongensis (strain HLHK9) GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C+G A + FLL+ G KG R A+P SR+ + P G +GQA D A E+L ++ + + ++ G+P E + +D R + +ALEYGLID+++ Sbjct: 95 DTMNFIKPSVSTLCIGQAASMGAFLLSAGAKGKRFALPNSRVMIHQPLGGFQGQASDFEIHAREILTLKRKLNELMAAHCGRPLEDLERDTDRDNFMNAAQALEYGLIDQVL 206
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_LACPL (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus plantarum GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = -1 Query: 274 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 627 DTM +KS V T +G A +A L + G KG R A+P S I + P+G A+GQ +I A+E+L+ R I + L+ +GQ EK+ D R +QEA +YGLID I+ ++K Sbjct: 79 DTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPNSEILIHQPSGGAQGQQTEIEIVAEEILKTRKKINQILADNSGQSVEKLNHDTERDNYLSAQEAKDYGLIDDIMENNKLK 196
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_DESPS (ATP-dependent Clp protease proteolytic subunit OS=Desulfotalea psychrophila GN=clpP PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 46/112 (41.07%), Postives = 62/112 (55.36%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K + T C+G A + LLA G G R A+P SRI + P G +GQA DI E+LR+R + L+ TG+ +KI D R S EA +YGLID ++ Sbjct: 79 DTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRIMIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEAQKYGLIDEVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CARRP (ATP-dependent Clp protease proteolytic subunit OS=Carsonella ruddii (strain PV) GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DT+Q LKS V T C+G A +A LLA G+KG R P SRI + P G A+GQA D+ A E++ ++ + + LS T +I KD R ++ L+YG+ID ++ Sbjct: 78 DTIQFLKSDVSTICIGQAASMAAVLLAAGKKGKRFCFPNSRIMIHQPLGYAQGQASDVEIHAREMINIKQILCEILSSHTNNSIFQIFKDTDRDNFMNCKQTLKYGIIDNVL 189
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_ACIAD (ATP-dependent Clp protease proteolytic subunit OS=Acinetobacter sp. (strain ADP1) GN=clpP PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T+C+G A + FLL G KG R + +R+ + P G RGQA DI A E+L +++ + + ++ +GQ +E++ +D R +Q A EYGL+D ++ Sbjct: 86 DTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARVMIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYERVARDTDRDNFMTAQAAKEYGLVDEVL 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP4_RHOSR (ATP-dependent Clp protease proteolytic subunit 4 OS=Rhodococcus sp. (strain RHA1) GN=clpP4 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ L+ + T+C+G A A LLA G KG+R + SR L P+ G D+ +A E++RVR LS+ TGQ E++ +D R + F ++EA+EYGL D ++ Sbjct: 81 DTMQFLRPTIATYCMGQAASAAAVLLAAGTKGHRHVLAHSRTLLHQPSTQGNGTISDLALQAAEIMRVRSQTEAILSKHTGQTVERLRRDTDRDRIFTAEEAIEYGLADTLV 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_STRCO (ATP-dependent Clp protease proteolytic subunit 2 OS=Streptomyces coelicolor GN=clpP2 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A A LLA G G R A+P +R+ + P + RGQ D+ A+E+LR+R + + L++ + P EKI +D+ R K +++AL YGLID+II Sbjct: 95 DTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIREDIERDKILTAEDALSYGLIDQII 207
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.150e-16 Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DT+ +K PV T C+G A A +L+ G KG R+++P + I L+ A+GQA DI+ A E++ + + + LS TGQ EK+ KD+ R +A EYGLIDR++ P Sbjct: 101 DTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRVLESP 215 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |