CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_DESDA (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=clpP PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DT++ + +PV T C+G A + FLLA G+ G R A+P S+I + P+ +GQA DI A E+LR+++ + + L+ TG+P++ I K R +EA + G+IDR++ Sbjct: 79 DTLRFISAPVSTVCMGRAASMGAFLLAAGKPGLRYALPNSQIMIHQPSAGYQGQATDIEIHAKEVLRLKERLNRILAENTGRPYKDIVKATERDNFLTPEEAKDLGIIDRVL 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_DESAA (ATP-dependent Clp protease proteolytic subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=clpP PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K + T C+G A + LLA G G R ++P +RI + P G +GQA DI +A E+LR+++ + + L+ TG+P +++ +D R EA EYGLID +I Sbjct: 79 DTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARILIHQPMGGFQGQASDIAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEAKEYGLIDHVI 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CAEEL (ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Caenorhabditis elegans GN=clpp-1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 DT+Q + +PV T +G A + LL GEKG RSA+P SRI + P+G A+G DI A+E+ R++ + + TG +++I K L R + + EAL++GL+D+I Sbjct: 101 DTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQI 211
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BACTN (ATP-dependent Clp protease proteolytic subunit OS=Bacteroides thetaiotaomicron GN=clpP PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ + S V T C G A +A LL G +G RSA+P SR+ + P G A+GQA DI A E+ +++ ++ ++ + F+K+ D R +QEA EYG+ID ++ Sbjct: 106 DTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALPHSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKEYGMIDEVL 217
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPPL_CYAPA (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Cyanophora paradoxa GN=clpP-B PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPA--GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DT+ +K+ + T C+G A ++ +LA G KG R A+P SRI + P G GQA D+ EA EL+ ++ + +TGQP I KDL R + F +Q A EYG ID ++ Sbjct: 81 DTILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDLAIEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLL 194
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP4_STRAW (ATP-dependent Clp protease proteolytic subunit 4 OS=Streptomyces avermitilis GN=clpP4 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K + T C+G A A LLA G G R A+P +R+ + P + RGQ D+ A+E+LR+R + L++ + P EKI +D+ R K +++AL YGLID+II Sbjct: 103 DTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPIEKIREDIERDKILTAEDALAYGLIDQII 215
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP3_FRASC (ATP-dependent Clp protease proteolytic subunit 3 OS=Frankia sp. (strain CcI3) GN=clpP3 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ + T C+G A A LLA G G R A+ SRI + P+ GQ+ DI +A E+LRVR L+R TG+ +I +D R K F + EA EYGLID +I Sbjct: 88 DTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILIHQPSAQGEGQSSDIEIQAREILRVRALQETMLARHTGRTETEIRRDTERDKIFSADEAEEYGLIDEVI 199
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_CORDI (ATP-dependent Clp protease proteolytic subunit 2 OS=Corynebacterium diphtheriae GN=clpP2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16 Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM+ + T+ +G A + FLL+GG KG R A+P +RI + P+ G A DI +A++ + + + + ++ TGQ FE+ITKD R + F +Q+A EYG++D +I Sbjct: 79 DTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIVDHVI 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_NEIMA (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup A GN=clpP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16 Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C+G A + FLL+ GEKG R A+P SRI + P +G GQA DI A ELL++++ + + +++ G+ + +D R ++EA EYGLID+++ Sbjct: 83 DTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQVL 196
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_NEIG1 (ATP-dependent Clp protease proteolytic subunit OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=clpP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16 Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM +K V T C+G A + FLL+ GEKG R A+P SRI + P +G GQA DI A ELL++++ + + +++ G+ + +D R ++EA EYGLID+++ Sbjct: 83 DTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQVL 196 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |