CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_XANC8 (ATP-dependent Clp protease proteolytic subunit OS=Xanthomonas campestris pv. campestris (strain 8004) GN=clpP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A + LLA G G R A+P SR+ + P G +GQA DI A E+L +R + + L++ TGQ E I +D R + +A YGL+D ++ Sbjct: 86 DTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSAVDAQAYGLVDHVL 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_COXBU (ATP-dependent Clp protease proteolytic subunit OS=Coxiella burnetii GN=clpP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = -1 Query: 289 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 627 DTMQ +K V T C+G A LLAGG KG R +P S + + G +GQ DI+ A + RV D + + L++ TG+ E++ KD +R +EA+EYGLID I + Sbjct: 80 DTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFK 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_COXBR (ATP-dependent Clp protease proteolytic subunit OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=clpP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = -1 Query: 289 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 627 DTMQ +K V T C+G A LLAGG KG R +P S + + G +GQ DI+ A + RV D + + L++ TG+ E++ KD +R +EA+EYGLID I + Sbjct: 80 DTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVEYGLIDSIFK 192
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BUCAI (ATP-dependent Clp protease proteolytic subunit OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=clpP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K + T C+G A +A LL G KG R +P S++ + P G +GQA DI A E++ ++ + K +S TGQ +KI KD R + ++++YGLID I+ Sbjct: 93 DTMQFVKPEISTICLGQACSMAALLLTSGAKGKRFCLPNSKVMIHQPLGGYQGQASDIAIHAREIMEMKKKLNKLMSFHTGQSIKKINKDTERDCFLSANQSIKYGLIDFIL 204
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_AZOBR (ATP-dependent Clp protease proteolytic subunit OS=Azospirillum brasilense GN=clpP PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ ++ V T C+G A + LLA G G R ++P SRI + P+G A+GQA DI +A E+L++R + + TGQ + I + R K +EA +GLID ++ Sbjct: 87 DTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAXMERDKFMSPEEAKAFGLIDEVV 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 43/122 (35.25%), Postives = 70/122 (57.38%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKED 627 DTMQ ++SP+ T C+G A +A LLA G KG R ++P + + + P+G GQA DI +++RV D + + + TGQP + + ++ R +EA +G+ID +I RP + +D Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKD 229
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_MYCLE (ATP-dependent Clp protease proteolytic subunit 1 OS=Mycobacterium leprae GN=clpP1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM + T+ +G A + FLLA G +G R A+P +RI + P G G A DI +A++ ++ +F+ + TGQP E+I D R + F + EALEYG +D II Sbjct: 79 DTMVLAPCDIATYAMGMAASMGEFLLAAGTRGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTASEALEYGFVDHII 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_LAWIP (ATP-dependent Clp protease proteolytic subunit OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=clpP PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTM + V T C+G A + LLA GEK R A+P S++ + P G +GQA DI A E+LR+R + + L +TGQ EK+ +D R +++A YGLID+++ Sbjct: 84 DTMNYITPNVATVCMGRAASMGALLLAAGEKNMRYALPNSQVMIHQPLGGYQGQATDIDIHAREILRMRQRLNEILMEQTGQSLEKVAQDTERDYFMTAEDAKAYGLIDKVL 195
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BRUME (ATP-dependent Clp protease proteolytic subunit OS=Brucella melitensis GN=clpP PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15 Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 627 DTMQ ++ PV T C+G A + LL G G+R A+ +RI + P+G +GQA DI A ++++++ + + + TG+ ++ I + L R +QEALE+GLID+++ + D Sbjct: 87 DTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSAD 206
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BRUMB (ATP-dependent Clp protease proteolytic subunit OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=clpP PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15 Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = -1 Query: 268 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 627 DTMQ ++ PV T C+G A + LL G G+R A+ +RI + P+G +GQA DI A ++++++ + + + TG+ ++ I + L R +QEALE+GLID+++ + D Sbjct: 87 DTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHRYALLNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSAD 206 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |