CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_ACIAC (ATP-dependent Clp protease proteolytic subunit OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=clpP PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+GFA + FLLA G KG R ++P S+I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + EA EYGL+D+++ Sbjct: 87 DTMQFIKPDVSTMCLGFAASMGAFLLAAGAKGKRFSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERDYFLTADEAKEYGLVDQVV 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNY3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpP2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21 Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = -1 Query: 271 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 627 DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I +A E+L ++D + L TGQP EK+ +D R ++EA EYGLID++I P + + Sbjct: 99 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPD 217
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21 Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DTM+ +KS + T CVG A + FLL+ G KG R A+P SRI + P G A+ QA DI EA E+LR+++ + K ++ TGQ +EKI KD R ++EA YGLIDR+I P Sbjct: 82 DTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPHSRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_METCA (ATP-dependent Clp protease proteolytic subunit 1 OS=Methylococcus capsulatus GN=clpP1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.308e-21 Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A + LLAGG G R +P SRI + P G +GQA DI A E+L VRD + K L+ TGQP EKI D R G +A+EYGLID+++ Sbjct: 87 DTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIHQPLGGFQGQASDIDIHAREILAVRDRLNKILAHHTGQPIEKIQIDTDRDNFMGGNDAVEYGLIDKVL 198
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CARHZ (ATP-dependent Clp protease proteolytic subunit OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=clpP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 52/112 (46.43%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG R ++P +RI + P G +GQA DI A E+LR+RD + + L++ TGQP EKI +D R + EA EYG+ID +I Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARIMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEAKEYGIIDEVI 191
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BORPE (ATP-dependent Clp protease proteolytic subunit OS=Bordetella pertussis GN=clpP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C G A + FLLA G+KG R +P SRI + P+G A+GQA DI+ +A E+L +R+ + + L+ TGQP E+I D R +++A+ YGL+D+++ Sbjct: 100 DTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVL 211
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BORPA (ATP-dependent Clp protease proteolytic subunit OS=Bordetella parapertussis GN=clpP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C G A + FLLA G+KG R +P SRI + P+G A+GQA DI+ +A E+L +R+ + + L+ TGQP E+I D R +++A+ YGL+D+++ Sbjct: 100 DTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVL 211
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_BORBR (ATP-dependent Clp protease proteolytic subunit OS=Bordetella bronchiseptica GN=clpP PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C G A + FLLA G+KG R +P SRI + P+G A+GQA DI+ +A E+L +R+ + + L+ TGQP E+I D R +++A+ YGL+D+++ Sbjct: 100 DTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRIMIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDAVSYGLVDKVL 211
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = -1 Query: 283 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 627 DT++ +KS V T CVG A + FLLA G KG R A+P SRI + P G ++ QA DI EA E+LR++D + ++ TGQ FEKI KD R ++EA YGLIDR+I P Sbjct: 82 DTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYFLSAEEAKNYGLIDRVITHP 197
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXD (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus (strain DK 1622) GN=clpP2 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21 Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = -1 Query: 262 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMP 627 DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI +A E+LR+R YI + + TG E+I KD R +++A +YGLID ++ R+ P Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVVEKQRVIAPTP 199 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |