CB304628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = -3 Query: 440 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 670 + ++GGL+ T + SL +AFS++ + E++++ ++ TGRSRG+GFV F E S AI MNGQ L+G NI+VN A+ Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAK 108
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 443 EFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 676 E + FVGGL + T + +L + FS++G I E ++ DRET RSRGFGF+ F + + A+ MNG++LDGR I V+ A Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = -3 Query: 440 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 670 R +VG LAW +L FS G ++++K++ DR++GRSRGFGFV + + + +AIE ++G +L+GR I V+ A+ Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 32/77 (41.56%), Postives = 52/77 (67.53%), Query Frame = -3 Query: 440 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 670 R +VG LAW +L FS G ++++K++ DR++GRSRGFGFV + + + +AIE ++G +L+GR I V+ A+ Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: HNRPG_PANTR (Heterogeneous nuclear ribonucleoprotein G OS=Pan troglodytes GN=RBMX PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + F+GGL T + +L F YG I+E ++ DRET +SRGF FV F +DA MNG++LDG+ I V +A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + F+GGL T + +L F YG I+E ++ DRET +SRGF FV F +DA MNG++LDG+ I V +A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -3 Query: 443 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEA 670 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+SRG+GFV D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86 The following BLAST results are available for this feature:
BLAST of CB304628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304628 ID=CB304628; Name=CB304628; organism=Citrus sinensis; type=EST; length=681bpback to top |