CB304629

Overview
NameCB304629
Unique NameCB304629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:1..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_MOUSE (Acetyl-CoA acetyltransferase, mitochondrial OS=Mus musculus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 78/170 (45.88%), Postives = 115/170 (67.65%), Query Frame = -2
Query:  202 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 711
            + D +K+ KL+  F++  GT+TA NAS+++DGA ALVL++ E   +L ++ +A+I  +ADAA  P  F  APA A+PK +  AGL+   +  +E+NEAF+VV LAN K+L ++P KVN+HGGAV+LGHP+G SGARI+V +   L  K  ++          GASAL++E
Sbjct:  255 RVDFSKVPKLKTVFQKENGTITAANASTLNDGAAALVLMTAEAAQRLNVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNIHGGAVSLGHPIGMSGARIVVHMAHAL--KPGEFGLASICNGGGGASALLIE 422          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_BOVIN (Acetyl-CoA acetyltransferase, mitochondrial OS=Bos taurus GN=ACAT1 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35
Identity = 76/170 (44.71%), Postives = 116/170 (68.24%), Query Frame = -2
Query:  202 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 711
            + D +K+ KL+  F+   GTVTA NAS+++DGA A+VL++ +   +L ++ +A+I  +ADAA  P  F  APA A+PK + +AGL+   +  +E+NEAF+VV LAN K+L ++P KVN++GGAV+LGHP+G SGARI+V L   L+Q   +Y          GASA++++
Sbjct:  253 RVDFSKIPKLKTVFQRENGTVTAANASTLNDGAAAVVLMTADAAKRLNVKPLARIAAFADAAVEPIDFPLAPAYAVPKVLKDAGLKKEDITMWEVNEAFSVVVLANIKMLEMDPQKVNINGGAVSLGHPIGMSGARIVVHLAHALKQ--GEYGLASICNGGGGASAMLIQ 420          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34
Identity = 78/170 (45.88%), Postives = 116/170 (68.24%), Query Frame = -2
Query:  202 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 711
            K D +K+ KL+  F +  GTVTA NAS+++DGA ALVL++ +   +L +  +AKI  +ADAA AP  F  APA A+PK +  AG++   +  +EINEAF+VV LAN K+L ++PD+VN++GGAV+LGHP+G SGARI+  ++  L  K+ +Y          GAS++V++
Sbjct:  251 KVDFSKVPKLKAVFLKENGTVTAANASTLNDGAAALVLMTADAAQRLNVTPLAKIVAFADAAVAPIDFPIAPAFAVPKVLKAAGIKKEDIAMWEINEAFSVVVLANIKMLDIDPDRVNINGGAVSLGHPIGMSGARIVGHMVHNL--KSGQYGLAGICNGGGGASSIVIQ 418          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_XENTR (Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.143e-33
Identity = 78/170 (45.88%), Postives = 114/170 (67.06%), Query Frame = -2
Query:  202 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 711
            + D +K  KL+  F+++ GTVTA NAS+++DGA ALVL++     +L +  +A+I  +ADAA  P  F  APA A+PK +S AGL+   +  +EINEAF+VV LAN K+L ++P +VNV+GGAV+LGHP+G SGARI+  +  VL  K  ++          GASA+++E
Sbjct:  251 RVDFSKFSKLKTVFQKDNGTVTAANASTLNDGAAALVLMTAGAASRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANVKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHVL--KKGQFGIAGICNGGGGASAVLIE 418          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THILB_XENLA (Acetyl-CoA acetyltransferase B, mitochondrial OS=Xenopus laevis GN=acat1-B PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33
Identity = 73/147 (49.66%), Postives = 105/147 (71.43%), Query Frame = -2
Query:  271 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 711
            + D +K  KL+  F+++ GTVTA N+S+++DGA ALVL++ E   +L +  +A+I  +ADAA  P  F  APA AIPK +S AGL+   +  +EINEAF+VV LAN K+L ++P +VNV+GGAV+LGHP+G SGARI+  +   LR+
Sbjct:  251 RVDFSKFPKLKTVFQKDNGTVTAANSSTLNDGAAALVLMTAEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAIPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLDIDPARVNVNGGAVSLGHPIGMSGARIVGHMAHALRK 397          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THILA_XENLA (Acetyl-CoA acetyltransferase A, mitochondrial OS=Xenopus laevis GN=acat1-A PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33
Identity = 76/170 (44.71%), Postives = 115/170 (67.65%), Query Frame = -2
Query:  202 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 711
            + D +K  KL+  F+++ GTVTA N+S+++DGA AL+L++ E   +L +  +A+I  +ADAA  P  F  APA A+PK +S AGL+   +  +EINEAF+VV LAN K+LG++P +VN++GGAV+LGHP+G SGARI+  +   L  K  ++          GASA+++E
Sbjct:  251 RVDFSKFPKLKTVFQKDNGTVTAANSSTLNDGAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDIAMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGHMAHAL--KKGQFGIAGICNGGGGASAVLIE 418          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32
Identity = 79/164 (48.17%), Postives = 99/164 (60.37%), Query Frame = -2
Query:  202 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 693
            L KL+P+FK+ G TVTAGNAS I+DGA AL+LVS  K   LGL+ IAKI  YA     P +    P  A  KA+  AG+    +D  E NEAFA   L   K L L+ +K N+HGGA+ALGHP+G SGARILVTLL  L +K+ K              +++VE
Sbjct:  229 LAKLKPAFKKEG-TVTAGNASGINDGAAALILVSESKAHALGLKAIAKIRSYASGGVDPSVMGLGPVPATQKALKKAGINLDDIDLIEANEAFASQFLGVGKDLNLDMNKTNIHGGAIALGHPIGASGARILVTLLHNLIEKDKKLGLATLCIGGGQGISMIVE 391          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.279e-32
Identity = 80/164 (48.78%), Postives = 102/164 (62.20%), Query Frame = -2
Query:  202 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 693
            L KLRP+FK++G TVTAGNAS I+DGA A++L+S +K  +LGL+ +A I GYA     PE+    P  A  KA+S AG     +D  E NEAFA  AL   K LG   DKVNV+GGA+ALGHP+G SG R+LVTLL  ++++  K              AL VE
Sbjct:  228 LAKLRPAFKKDG-TVTAGNASGINDGAAAVLLMSTQKADQLGLKPLAIIKGYALTGCEPEIMGIGPVSATRKALSKAGWTVEDLDLVEANEAFAAQALGVAKELGWGSDKVNVNGGAIALGHPIGASGCRVLVTLLHEMQRRGAKKGLATLCIGGGMGVALAVE 390          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = -2
Query:  259 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFA---VVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWK 693
            L +LRP+F    GTVTAG +S ++DGA+A+VL+S E+   LGL  IAKI   A A   P +    P  A  KA+  AGL+   +D +E+NEAFA   +  L + KLLG+  +KVN++GGA+ALGHPLGCSGARI  TLL +++ K  K
Sbjct:  223 LGQLRPAFDPKNGTVTAGTSSQLTDGASAMVLMSAERAEALGLTPIAKIRSMAVAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAGQSLPVLKDLKLLGVMEEKVNLNGGAIALGHPLGCSGARISTTLLNIMQAKGGK 370          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 69/142 (48.59%), Postives = 96/142 (67.61%), Query Frame = -2
Query:  268 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQK 693
            L KL+P+FK+ GG+ TAGN+S +SDGA A++L    K  +LGL ++  +  YA     P++    PA AIP A+  AGL  + +D +EINEAFA  AL   + LG+  +KVN  GGA+ALGHPLGC+GAR +VTLL  L+++
Sbjct:  257 LAKLKPAFKD-GGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRR 397          
The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIL_MOUSE5.101e-3545.88Acetyl-CoA acetyltransferase, mitochondrial OS=Mus... [more]
THIL_BOVIN8.701e-3544.71Acetyl-CoA acetyltransferase, mitochondrial OS=Bos... [more]
THIL_DANRE1.484e-3445.88Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]
THIL_XENTR2.143e-3345.88Acetyl-CoA acetyltransferase, mitochondrial OS=Xen... [more]
THILB_XENLA2.799e-3349.66Acetyl-CoA acetyltransferase B, mitochondrial OS=X... [more]
THILA_XENLA6.235e-3344.71Acetyl-CoA acetyltransferase A, mitochondrial OS=X... [more]
ATOB_HAEIN4.042e-3248.17Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIL_CHRVO5.279e-3248.78Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
FADA_MARAV2.620e-3149.323-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
THIKB_RAT9.955e-3148.593-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGCAAAGCCAGCCAGATA
ATTATTATCTTTTTATTGAAGACGAAAGCACATATGAATAAGAAATGGAG
ATACAATTGCACAACACCCCACCCAAATGGGCCATAATTATCCTCCACAA
GAAGGGTGCAACCTCGTTGATAATAATCCGAACAGAAAATGCTTACACAA
GCTCTACAACAAGTGCCGATGCACCTCCTCCTCCGTTGCAAACGCCACCA
ACACCGTATTTCCAGTTTTTCTGCCTAAGTACCCCCAAAAGTGTGACCAA
GATACGAGCTCCGCTGCAGCCCAGAGGATGTCCCAAAGCTACTGCTCCAC
CATGGACATTAACCTTGTCAGGATTTAGTCCAAGCAATTTCTGGTTTGCA
AGGGCGACGACAGCAAAGGCCTCATTTATTTCGTAACAGTCAACTTGAGA
AGCCTCCAAGCCAGCATTTGAAATGGCTTTAGGTATGGCTAGGGCTGGAG
CTGTTGTAAACATCTCTGGTGCCTGAGCAGCATCAGCATATCCTGTGATC
TTGGCGATCACTTGCAAACCCAGCTTAAGTACCTTCTCTCCACTGACTAG
AACTAATGCTGTAGCTCCATCACTTATACTAGAGGCATTGCCAGCCGTAA
CAGTTCCTCCATTCTCCTTGAAACTTGGTCGAAGCTTCCTCAATTTTGCC
GGGTCAAACTTGCCTAAA
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