CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = -2 Query: 271 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 693 L +RP+F ++ GT TAGNAS +SDG ++L +L L V+ + + PE+ PA AIPK + GL+ +D +EINEAFA AL LG++ +KVN GGA+ALGHPLGC+GAR + T+L L++ Sbjct: 254 LSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK 394
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SALTY (3-ketoacyl-CoA thiolase OS=Salmonella typhimurium GN=fadA PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +K+ ++ Sbjct: 219 LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SALTI (3-ketoacyl-CoA thiolase OS=Salmonella typhi GN=fadA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +K+ ++ Sbjct: 219 LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SALPA (3-ketoacyl-CoA thiolase OS=Salmonella paratyphi A GN=fadA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +K+ ++ Sbjct: 219 LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SALCH (3-ketoacyl-CoA thiolase OS=Salmonella choleraesuis GN=fadA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27 Identity = 66/149 (44.30%), Postives = 95/149 (63.76%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +K+ ++ Sbjct: 219 LSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERKDAQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26 Identity = 68/147 (46.26%), Postives = 93/147 (63.27%), Query Frame = -2 Query: 256 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 696 +L+KL P FK++G TVTAGNAS I+DGA A+++ S + V K +A+I GY + P + P AI A+ AGL +D E+NEAFA LA ++ L L+ K NV+GGA+ALGHPLG SG+RI L+ LR++ KY Sbjct: 231 QLQKLPPVFKKDG-TVTAGNASGIADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKY 376
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.139e-26 Identity = 67/151 (44.37%), Postives = 95/151 (62.91%), Query Frame = -2 Query: 256 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 699 A L LRP+F GTVTAG +S++SDGA+A++++S + LGL A+I A P + P A A+ AGL+ + +E+NEAFA +LA K LGL DKVN++GGA+ALGHPLGCSGARI TLL ++ +++ ++ Sbjct: 217 AGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLKLEDIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMERRDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26 Identity = 67/147 (45.58%), Postives = 90/147 (61.22%), Query Frame = -2 Query: 256 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 696 +L+ L P FK+ G TVTAGNAS +SDGA +++ S + V K +A++ GY + P + P AI A+ AGL +D ++NEAFA LA QK L L+P K NV GGA+ALGHPLG SG+RI L+ LR++ KY Sbjct: 231 QLQNLPPVFKKEG-TVTAGNASGMSDGAGVVIIASEDAVKKHNFTPLARVVGYFVSGCDPAIMGIGPVPAITGALKKAGLSLKDMDLIDVNEAFAPQFLAVQKSLDLDPSKTNVSGGAIALGHPLGGSGSRITAHLVHELRRRGGKY 376
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26 Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = -2 Query: 256 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 696 +L+KL P FK++G TVTAGNAS ++DGA A+++ S + V K +A+I GY + P + P AI A+ AGL +D E+NEAFA LA ++ L L+ K NV+GGA+ALGHPLG SG+RI L+ LR++ KY Sbjct: 231 QLQKLPPVFKKDG-TVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKY 376
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26 Identity = 66/151 (43.71%), Postives = 94/151 (62.25%), Query Frame = -2 Query: 256 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 699 A L LRP+F GTVTAG +S++SDGA+A++L+S + LGL+ A+I A P + P A A+ AGL +D +E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSG+RI TLL + +++ ++ Sbjct: 217 ASLAALRPAFDPVNGTVTAGTSSALSDGASAMLLMSESRAKALGLKARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQSLPCIKDLGLLDSIDDKINLNGGAIALGHPLGCSGSRISTTLLNNMERRDVQF 367 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |