CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIBY (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE) GN=fadA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIBT (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fadA PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIBS (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF) GN=fadA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIBC (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU) GN=fadA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIB5 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057) GN=fadA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ACIB3 (3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB307-0294) GN=fadA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.328e-26 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = -2 Query: 196 RKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL--NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 690 + L+P F GG+VTA +S++SDGA+A++L+S E+ LGL+ A I A A + P A KA+ AGL + + E+NEAFA L+ K LGL D VN++GGA+ALGHPLGCSGARI TLL V+ Q++ + A V+E V Sbjct: 224 KALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV 390
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 74/168 (44.05%), Postives = 94/168 (55.95%), Query Frame = -2 Query: 196 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 693 L KL+ K G +VTAGNAS I+DGA A+++ S E V + L+ AKI P + APA AI K + A L Q+D E+NEAFA ALA + LGL D +VN +GGA+ALGHPLG SGAR++ T L L Q KY AL++E V Sbjct: 235 LAKLKGVVKPEG-SVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYALCSMCIGVGQGIALIIERV 401
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ K+ ++ Sbjct: 219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEHKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHIFL (3-ketoacyl-CoA thiolase OS=Shigella flexneri GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHIF8 (3-ketoacyl-CoA thiolase OS=Shigella flexneri serotype 5b (strain 8401) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |