CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCNPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 265 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 693 L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDKD 364
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 265 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 693 L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDKD 364
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 265 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 693 L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 219 LAALRPVFDPVNGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVADLDVIELNEAFAAQSLPCVKDLGLADVVDDKINLNGGAIALGHPLGCSGARISTTLINLMEDKD 364
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = -2 Query: 265 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 693 L +L+P+F GTVTAG +S++SDGA A++++S + +LGL A+I A P + P A A+ AGL AS +D +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TL+ ++ +++ Sbjct: 219 LSQLKPAFDPANGTVTAGTSSALSDGAAAMLVMSESRARELGLTPRARIRSMAVVGCDPSIMGYGPVPASKLALKKAGLTASDIDLFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERRD 364
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ K+ ++ Sbjct: 219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEHKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ECOK1 (3-ketoacyl-CoA thiolase OS=Escherichia coli O1:K1 / APEC GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ K+ ++ Sbjct: 219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMEHKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/149 (43.62%), Postives = 94/149 (63.09%), Query Frame = -2 Query: 256 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 693 L LRP+F GTVTAG +S++SDGA A++++S + +LGL+ A++ A P + P A A+ AGL AS + +E+NEAFA L K LGL +K+N++GGA+ALGHPLGCSGARI TLL ++ +K+ ++ Sbjct: 219 LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQF 367
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 74/168 (44.05%), Postives = 94/168 (55.95%), Query Frame = -2 Query: 196 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 693 L KL+ K G +VTAGNAS I+DGA A+++ S E V + L+ AKI P + APA AI K + A L Q+D E+NEAFA ALA + LGL D +VN +GGA+ALGHPLG SGAR++ T L L Q KY AL++E V Sbjct: 235 LAKLKGVVKPEG-SVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYALCSMCIGVGQGIALIIERV 401
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADA_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2 Query: 265 LRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKN 693 L LRP F GTVTAG +S++SDGA+A++++ K LGL + A+I A A + P A KA++ AG+ + +D E+NEAFA +L K LGL DK+N++GGA+ALGHPLGCSGARI TL+ ++ K+ Sbjct: 219 LAALRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVEDKINLNGGAIALGHPLGCSGARISTTLINLMEHKD 364 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |