CB304629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOLC (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOHS (3-ketoacyl-CoA thiolase OS=Escherichia coli O9:H4 (strain HS) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECODH (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / DH10B) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECOBW (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain K12 / BW2952) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO8A (3-ketoacyl-CoA thiolase OS=Escherichia coli O8 (strain IAI1) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO27 (3-ketoacyl-CoA thiolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_ECO24 (3-ketoacyl-CoA thiolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadI PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: YKA3_CAEEL (Uncharacterized protein B0303.3 OS=Caenorhabditis elegans GN=B0303.3 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 59/165 (35.76%), Postives = 89/165 (53.94%), Query Frame = -2 Query: 256 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAP-EMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLL----------------GLNP-DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKY 696 KL L+P+F + GTVTA NAS ++DGA+A ++++ E L G + A + Y AQ P + +PA IPK + AGL VD +EI+EAFA LAN + G P DK+N+ GG++++GHP G +G R+ L+++ +Y Sbjct: 262 KLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQY 426
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SHIB3 (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadI PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = -2 Query: 202 GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 714 G A KLRP+F GTVTA N++ ++DGA A++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 246 GNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: FADI_SALAR (3-ketoacyl-CoA thiolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fadI PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = -2 Query: 202 AKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 699 A KLRP+F G+VTA N++ ++DGA A++L++ + +LGL+ + + YA A + PA + P A+ AGL + + ++++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR++ + +A+V+E Sbjct: 251 ADYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLFDMHEAFAAQTLANLQLLGSERFARDVLGRAQATGEVDDTKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bpback to top |